Pseudomonas fluorescens UK4: HZ99_01055
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Entry
HZ99_01055 CDS
T03319
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_01055
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZ99_01055
Archaeal homologous recombinant proteins
HZ99_01055
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AIG00841
UniProt:
A0A379ICD8
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Position
complement(298862..300103)
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLGQIKQHCPDALLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPGPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIAAANAKRKKG
QALVAISHAHMAGGSVSEDSERSLIIGNAEALPAKLFDKSVGYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGERLASVDPILIPRSVNLQRLEAAPLADILKAL
ADLPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALLGKAVRLVRIAAEYAGQRGSE
ASDEERLIELDQLTPQELFSRAWQESYGNDVDEQTLKDFVVLLQDVQQEHEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcacctgggccaaaacctccacggccaggagcgc
gacttcgagcacgcctgcttcctcgattggctgctgggccagatcaagcaacattgcccc
gacgcactgctgatcgccggcgatatcttcgacacggtcaacccgccgctcaaggcccag
gagcggctgtacgatttcatcatcagcgcccacgaacaaaacccgaagctgaccatcgtg
atgatcgccggcaaccacgactccggttcgcgcatcgaactgcccgggccgttgatgcgg
cgtttgcgtacccatgcgttgggccgcgtgctatggctggatgatggccaactggatgcc
gaacgcctgctgatcccgctgccggatgccaaaggcaagatcgccgcgtggtgcctggcc
ttgccattcctgcgcccggcagaagtgaccggtgcacacctgggtgacgactacctgcgc
ggtatcggccaggtacatgaatggctgattgccgccgccaacgccaaacgtaaaaaaggc
caggcgctggttgccatcagccacgcgcatatggctggtggttcggtgtcggaagattcc
gagcgcagcctgatcatcggcaatgccgaggcgctgccggccaagctgttcgacaagagc
gtcggttatgttgccctcggccatttgcacaagccgcaaaaggtgaatggcgaagaacgc
attcgctacagcggctcgccgattccactgtcgttttccgaaatcggctacaagcaccag
attctcgacgtgacgttccagggcgaaagactggccagcgtcgaccccatcctgattccg
cgctcggtcaacctgcaacgcctggaagccgcgcccctggccgatatcctcaaggcactg
gcggatctgccggatatcgacctgctcgccgaaacccagcgccacccctggctcgaagtg
cgggtgcgtctggacgaaccgcaaccggacctgcgccagcaaatcgaaaccgccctgctt
ggcaaggccgtgcgcctggtgcgcatcgctgctgagtacgccggtcaacgtggcagcgag
gccagtgacgaagagcgcttgatcgaactcgaccaactcaccccccaggaactgttcagc
cgcgcctggcaggaaagttacggcaatgacgtggatgaacagaccctgaaggatttcgtc
gtgctgctccaggacgtgcaacaggagcatgaacagccatga
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