Pseudomonas fluorescens UK4: HZ99_02430
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Entry
HZ99_02430 CDS
T03319
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfn02000
]
HZ99_02430
Transporters [BR:
pfn02000
]
Other transporters
Pores ion channels [TC:
1
]
HZ99_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
sCache_3_3
Cache_3-Cache_2
Motif
Other DBs
NCBI-ProteinID:
AIG01085
LinkDB
All DBs
Position
complement(557001..559109)
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AA seq
702 aa
AA seq
DB search
MPQHSSSSFKTVSALTLILASQWAHAEDSRLQTVTVQASKVTASEEAQLKLDEVAGGVSL
VKAGDVERGRSATLEDTLAYQPGVYAQSAGGNDAIKISIRGSGANTSPGYFREGTKFLFD
GLALTGSGGTPYELLETQGLDYTEVLRGANAFQYGALSLGGAINMVTHSGLTSPGNHARF
EAGSFGWRKQQLSTGGVVDNGDYYVSLSNSERDGYQDWTFTKAKGVVTNFGYRFNPKLET
RLFVRYREEYHESSGTLTKAQLKHDSSQTNPVALASRDDSTKRGSTWVASKTTYTFDDDA
TLDFGLVYHNYPQVLYRKSTVNPNYWDWRDLNLSLTYNRSDQIQGHTSNTSLSLTSTQHL
QAGVKTYNGNPASSTYGALQKQARYTGSFDRVFAAGNDLQLTDRLWLSTGLSLSQIKRDI
EVRYSDRANTSPYPDHYNYDSWNVAPRLGLRYEITPSFQVFGNVSRSIDPPSSWSSSGSG
VTSNYAKTLTEQKANTVEFGVRGKAGIFDASLAVYRSWIKDELLTVEVIPATRTTAAVNS
TSNASPTIHQGIEAGLDTELWQSARGEKVSLRQAYTLNDFYYRNDERFGSNELPGLPRHV
YQAELQYRHPDGFYAGVNVRSVSSTAVDYANTLYAPSYTIFGAKLGYEAPSKKWQVYLDV
KNLTDQNYVTAIQPIYDAQGKDVAALYPGDGFGAFTGVAFNF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ctgcctcaacactcctccagctcgtttaaaaccgtcagcgctctgaccttgatcctcgct
tcccagtgggcccacgccgaggattcgcgcctgcagaccgtaacggtccaggccagcaag
gtcaccgccagcgaagaagcccagctcaagctcgacgaggtggccggcggcgtcagcctg
gtcaaggctggcgacgtggagcgcggccgttcggcgacgctggaagacaccctcgcctat
cagcccggcgtgtatgcgcagtcagcgggcggcaacgatgcgatcaagatttccatccgc
ggttccggggccaatacctcccccgggtattttcgcgagggcaccaagttcctgttcgac
ggcctggccctgaccggatccggcggcacgccctatgagctcctggaaacccagggcctg
gactacaccgaagtgctgcgcggggccaatgccttccagtacggcgcgctgtcgctgggt
ggcgcgatcaacatggtgactcactccggcctgacgtcaccgggcaatcacgcgcgcttc
gaggctggcagctttggctggcgcaagcagcagttgagcaccggcggcgtggtggacaat
ggcgactactacgtcagcctgagcaactccgaacgcgacggttaccaggactggaccttc
accaaggccaagggcgtggtgaccaacttcggctaccgcttcaaccccaagttggaaacc
cggctgttcgtgcgctaccgcgaggaataccacgaaagctccggcaccctgaccaaggcc
cagctcaagcacgactcatcgcaaaccaacccggtggccctggccagccgcgatgactcc
accaagcgcggttcgacctgggtcgccagcaagaccacctacaccttcgacgacgacgcc
accctggattttggcctggtctaccacaactacccgcaggtgctgtaccgcaagagcacg
gtcaaccccaactattgggactggcgcgacctgaacctgtcgctgacctataaccgcagc
gaccagatccagggccacaccagcaacacctccctgagcctgaccagcacccagcacttg
caggccggggtcaagacctacaacggcaacccggcctccagcacctacggcgccctgcag
aaacaggcacgctacaccggctcgttcgaccgcgtgtttgccgccggcaatgacctgcaa
ctgactgaccgcctgtggctgtccaccggcctgtcactgagccagatcaagcgtgatatc
gaggtgcgctactcggaccgcgccaatacctcgccctaccctgaccactacaactacgac
agctggaacgtcgcgccacgcctgggtttacgctacgaaatcacgccgagtttccaggtg
ttcggcaacgtcagccgctccatcgacccgcccagcagttggtcgtcgtcaggctccggg
gtcaccagcaactacgccaagaccctcaccgaacagaaggccaataccgttgaatttggc
gtgcgcggcaaagccgggattttcgacgccagcctggcggtgtaccgctcctggatcaag
gatgaactgctcaccgtcgaagtgattccggccacccgtaccacagcggcggtcaactcg
acgtccaacgccagcccgaccattcaccagggcatcgaagccggcctggacaccgagctg
tggcaaagtgcgcgcggcgaaaaagtcagcctgcgccaggcctacacccttaacgacttc
tactaccgcaacgacgaacgctttggctccaacgagctgccgggcctgcccaggcacgtg
taccaggccgaactgcaataccgccatcccgacgggttctatgccggggtcaatgtgcgt
tcggtatcgagtaccgccgtggactacgccaacaccctgtatgcgccctcctacacgatc
ttcggcgccaaactggggtatgaagccccgagcaagaaatggcaggtgtacctggacgtg
aaaaacctcaccgaccagaactatgtcaccgccatccagccgatctacgacgcccagggc
aaggacgttgccgcgctgtacccgggggacggctttggcgccttcaccggtgtggcgttc
aacttctaa
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