Pseudomonas fluorescens UK4: HZ99_05875
Help
Entry
HZ99_05875 CDS
T03319
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfn03000
]
HZ99_05875
Transcription factors [BR:
pfn03000
]
Prokaryotic type
Helix-turn-helix
Other families
HZ99_05875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
MimR_N
nSTAND6
AAA_5
AAA_2
HTH_7
AAA_3
HTH_23
Mg_chelatase
AAA
AAA_7
HTH_22
HTH_10
AAA_16
PAS
nSTAND3
HTH_28
HTH_20
MCM
HTH_11
HTH_psq
DUF2089
HTH_Tnp_1
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AIG01713
LinkDB
All DBs
Position
1365722..1367542
Genome browser
AA seq
606 aa
AA seq
DB search
MATPTPLLPHDTIIQDSWRRCRAFGLDHQSAPSFDQLPAEGISQLLESQHSLINTTHQEV
LPYYENILSNSNCLIMLADNQGQVLSSWGTQRFIEPKLARGFSAGAGWMERSTGTNAIGT
ALACAQAVHIEHDEHFLKANRFMTGSAAPIFDAHREIIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNRFGGEHFQLTFNTGLNNLDSQWAGLLIFDESGHVLSANRRADNLLGIS
LSRVMIDSLFKVSLLELLNQPEGLPFALQAAGRNRFQCLLKRPKQTPVQARVFSQPAPAA
IGLKTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQTSSRSQQAFIA
VNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQARLL
RVLQERCVQPVGSSELFPVDLRIISATNRSLRDQVQIGRFREDLYYRIGGLTLQLPPLRE
RSDKQALFKQLWRQHREPTQWAGLSTEVLALFEQHPWPGNLRQASSVIQVALAMAADQPI
RPEHLPDDFFIDLGQASPSAPVVMGDREESQNLQQRLAAVGGNISHLARELGVSRNTLYK
RLRDAT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccacacctaccccgctgttgccccacgacaccatcatccaggactcctggcgccgc
tgtcgcgccttcggcctggatcaccagagcgctcccagcttcgatcagctgccagcggag
ggcatcagccaattgctggagagccagcactcgctgataaacaccacccaccaggaagtg
ttgccctactacgagaacatcctcagcaactccaactgcctgatcatgcttgccgacaac
cagggccaggtcctgagttcctggggcacccagcgcttcatcgaacccaagctggcccgt
ggtttcagtgccggggccggttggatggaacgctccaccggcaccaacgccatcggcacc
gcgctggcctgcgcccaggcggtacatatcgagcatgacgaacacttcctcaaggccaac
cgcttcatgaccggctcggccgcaccgatctttgatgcccaccgcgaaatcattgcggtg
ctggatgtatccagcgacagctacctgccgccctcccacaccctgggcatggtcaagatg
atgagccagaccgtggaaaaccggttgatcctcaatcggtttggcggcgaacacttccaa
ttgaccttcaataccggcctgaacaacctcgacagccagtgggccggcctgctgatcttt
gatgaaagcggccacgtgctttcagccaatcgccgcgccgacaatctgttgggcatcagc
ctttcgcgggtcatgatcgacagcctgttcaaggtctcgctgctggagctgctcaaccag
cccgagggcctgccttttgccctgcaggccgccgggcgcaaccgtttccagtgcctgctc
aaacgccccaagcagacgccggtccaggcccgggtcttcagccagccagcccccgcggcc
attggcctcaagaccctgcactttggcgatagccgcgtcgaaaaagccgtgcgccaggcc
gaacgcctgctggaaaaagacatcccgttactgatccacggcgaaaccggggtgggcaag
gaagtcttcgtcaaagccctgcaccagaccagctcccgcagccagcaagcatttatcgcg
gtcaactgtgcggcaattcctgcggaactggtggaatcggagttgttcggctacgaaaaa
ggtgcattcaccggcgccaatcaaaaaggcagcatcggcctgatccgcaaggcggacaaa
ggcacgctgtttctcgatgagatcggtgacatgcccttgcccacccaggcccgcctgcta
cgagtattgcaggaacgctgtgtacagcccgtgggcagcagcgaactgttcccagtggac
ctgcgcattatctcggccaccaatcgctcgctgcgtgaccaggtgcagatcggacggttt
cgtgaggatttgtactaccgcatcggcggcctgacgctgcaactgccacccctgcgcgag
cgcagcgacaaacaggcgctgttcaagcaactgtggcgacagcaccgcgaacccacgcag
tgggccgggctcagcaccgaggtgctggcgttgttcgagcaacatccctggccaggcaac
ttgcgccaggccagcagcgtgatacaggtggcactggccatggccgcagatcaaccgatc
cgcccggagcatctgccggatgatttttttatcgacctgggccaagcctcgcccagcgca
ccggtggttatgggcgatcgggaggaaagccaaaaccttcagcaacgactggcagcggtc
ggcggcaatatctcccacttggcgcgggagttgggggtcagccgcaataccttgtacaag
cgattacgcgacgctacgtag
DBGET
integrated database retrieval system
