Pseudomonas fluorescens UK4: HZ99_06715
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Entry
HZ99_06715 CDS
T03319
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn00300
Lysine biosynthesis
pfn00470
D-Amino acid metabolism
pfn01100
Metabolic pathways
pfn01110
Biosynthesis of secondary metabolites
pfn01120
Microbial metabolism in diverse environments
pfn01230
Biosynthesis of amino acids
Module
pfn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HZ99_06715
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HZ99_06715
Enzymes [BR:
pfn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HZ99_06715
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AIG01870
UniProt:
A0A379IFW6
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All DBs
Position
complement(1545404..1546375)
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AA seq
323 aa
AA seq
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MTLFYDARGNIYGVASPALLRRRGVAVPESAAQAASTRQGWAASAITSECGWGASLRPTG
AKVYRCDGLLVGPFQTAPPYDLLIINTDGSLAERSGNGLTIFAQSLADAGLMTQSCELRV
HHDQPDVLSPVATWVEPTVYGQVSGFWLALGRPAFGPQAVGAIGLGVAGPCRVSELAAIN
PQWARSQFVRIGNPHCVTLVEHVSGLPDNRQMHQSELFEQLRAIAFAPPAGDGRPCAAGV
NLQWAARDSANRVIARVFERGEGPTASSGTSACAVACAAWRAGWVEAGEVAVVMPGGTAP
VRLQVQAGRLMSVSLFGTATPQG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgactctgttctacgacgctcgcggcaatatctacggtgtggccagcccggctctgtta
cgccgccggggcgttgccgtccccgagagtgctgcccaggccgccagtacacgccagggg
tgggcagcatcggcgataacgtccgaatgtggctggggggcgtcgctgcgtccaaccggg
gccaaggtctatcgctgcgatggcttgctggtcgggccgttccagactgcaccgccctat
gacctgctgatcatcaataccgatggttccctggccgagcgtagcggtaatggcttgact
atctttgcccagtccctggcagatgcgggcctgatgacccagtcctgcgagctgcgggtg
caccacgaccaacccgacgtactatcgccagttgcaacctgggtcgagccgacggtctat
gggcaggtttcggggttctggctggcactggggcggccggcattcgggccgcaggcggta
ggggcgattgggctcggcgtcgccgggccttgccgggtgagtgaactggctgcgatcaac
ccgcaatgggcgcgcagtcaatttgtgcgtatcggcaacccccattgcgtgaccttggtc
gagcatgtatcgggtttgccggacaatcggcagatgcaccagtctgagctgttcgagcaa
ctgagagcgattgcctttgcccctccggcaggtgatggtcggccctgcgctgccggggtc
aatctgcaatgggccgctcgagactctgccaatcgggtgattgcccgggtattcgagcgc
ggcgaggggcccacggcgtcctccgggaccagtgcctgcgcagtggcctgtgcagcatgg
cgcgcgggctgggtcgaggcgggagaggttgccgtggtgatgccgggcggcacggcgcca
gtacgtttgcaggttcaggcgggtaggttgatgagtgtcagtctgttcgggactgcaaca
cctcaaggctga
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