Pseudomonas fluorescens UK4: HZ99_07540
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Entry
HZ99_07540 CDS
T03319
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfn03016
]
HZ99_07540
Enzymes [BR:
pfn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HZ99_07540
Transfer RNA biogenesis [BR:
pfn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HZ99_07540
Prokaryotic type
HZ99_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIG02020
LinkDB
All DBs
Position
complement(1710882..1711706)
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AA seq
274 aa
AA seq
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MAAAGFFRIALGVEYKGSRYRGWQRQASGVLTVQETLEKALSKVADSPVSLMCAGRTDAG
VHACGQVVHFDTQAERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDAERMAEAARHLVGVHDFSAFRAGQCQAKSPIKEVHHLR
VTRHGKMIVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAREVLESRVRRTGGVTAHP
FGLYLVDVEYREEFELPQRFIGPHFLTGFTELGG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccggctttttcagaatcgccctgggcgtggaatacaaaggttcgcgctat
cgcggctggcaacgccaggcctctggcgtgctgaccgtgcaggaaaccctggagaaggcc
ctgtcgaaggtcgccgactcgccggtgtcattgatgtgtgccgggcgcaccgacgcgggc
gtacatgcctgtgggcaagtggtgcattttgacacccaggccgagcgttcgatgaaggcc
tgggtcatgggggccaatatcaatctgccccatgatgtcagcgtcagttgggccaaggtc
atgccggcgcacttccacgcgcgattcaaggccattgcccggcgttaccgctatgtgatc
tacaacgatcagatccgtccggcgcacttgaacgaagaaatcacctggaaccaccgtccg
ctggacgccgagcgcatggccgaggcggcccggcacctggtaggggtccacgatttcagt
gcgttccgcgccggccagtgccaggccaagtcgccgatcaaggaggtccatcacctacgg
gtgacacgccatggcaaaatgattgtcctggatatccgtgccggggcgtttctgcaccat
atggtgcgcaatatcgccggggtgctgatgaccattggcaccggcgagcgcccggtggag
tgggccagggaagtgctggagagccgggtgcggcgtaccggtggggtgacggcgcatccg
ttcggcctgtatctggtggatgtggagtaccgcgaggagttcgagctgccgcagcgtttc
atcgggccacacttcctcacaggcttcactgaacttggcggctga
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