Pseudomonas fluorescens UK4: HZ99_08385
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Entry
HZ99_08385 CDS
T03319
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03030
DNA replication
pfn03430
Mismatch repair
pfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZ99_08385
03430 Mismatch repair
HZ99_08385
03440 Homologous recombination
HZ99_08385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfn03032
]
HZ99_08385
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_08385
Enzymes [BR:
pfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZ99_08385
DNA replication proteins [BR:
pfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZ99_08385
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZ99_08385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_16
AAA_30
TIP49
AAA_18
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
DUF3646
AAA_7
HasA
Rad17
Mg_chelatase
SKI
RsgA_GTPase
zf-CXXC
Herpes_Helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AIG02169
UniProt:
A0A379IGV3
LinkDB
All DBs
Position
complement(1890562..1892613)
Genome browser
AA seq
683 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMATDVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALARALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVMLRMLAFRP
ADTADAPRQPLKPVGISQATVDSAKPVAGAAVVAPVIAPEPVTATPAPVADEPVAPVAAP
EPVAEPEPAPVVDLPWNDPAEAAAELAPAVEPVLETTGEQPELTPMPTPTPDSVVPDAPE
WVSAPVPEPTMAEVDAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDDLASEHTAEPAPEP
EAEPAAMPATGLALQWLELFPKLSISGMTGSIAANCTLIAVEGDHWLLHLDPAHSALFNA
TQQRRLNDALNQFHERTLTVTIELIKPEQETPAQAATRRRLNRQREAEESIHADPLIQQM
MEQFGAVVRHDTIEPVEAQAAAG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgcccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggttgcaccacgcc
tacctgttcaccggcacgcgcggggtgggcaaaaccaccattgcacggatcattgccaag
tgtctgaactgtgagacgggtatcacttcgaccccctgtggtacctgctcggtatgccgg
gagatcgacgaagggcgttttgtcgacctgatcgagatcgacgccgcgagccgtaccaag
gtcgaggacacccgcgaactgctcgacaacgtgcagtatgcccctagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccattccttcaacgccctgttg
aaaaccctggaggagccgccgccctacgttaaattcatcctggccaccaccgatcctcag
aaacttcctgcaacgattttgtcgcgctgcctgcagttctccctgaagaacatgaccccc
gagcgggtggtcgagcatttgacacacgtgctgggtgtggagaacgtgccgttcgaagac
gacgcgctgtggctgctgggccgtgccgccgatggttcgatgcgtgatgccatgagcctg
accgaccaggcgattgccttcggcgaaggcaaggtcatggccaccgatgtgcgtgccatg
cttggcaccctcgatcacggccaggtctttgacgtgttgcatgcgctgatcgaaggcgat
gccaaggccttgctggaagctgtccgccatttgtcggaacagggcccggactggaatggc
gtgctctcggaaattctcaatgtgctgcaccgtgtcgctatcgcccaggcgctgcctgaa
ggcgtcgataacggccatggcgaccgcgatcgtgtgttggccctggcccgggcattgccg
gccgaagatgtgcagttttactaccagatgggccttatcggccgtcgcgacctgccgttg
gcacccgacccgcgcggcgggtttgaaatggtcatgctgcgcatgctggcgttccgcccg
gcagacaccgccgacgcgccgagacagccgctaaagccagtgggaatcagccaggccaca
gttgattccgccaaaccagtggctggcgcggcggtcgtcgcgccagtgattgcgccggaa
cctgtgacagccacgcccgctccagtcgccgatgagcctgtggcacctgtggcagcgccg
gagccggttgccgagcctgagcccgcgcctgtggtcgatctgccgtggaacgacccggca
gaggccgcggccgagctggcacctgcggtcgaaccggtgctggaaaccaccggcgagcag
cctgagttgacgccgatgccgacgccgacccccgacagcgtggtgccggacgcgccggaa
tgggtctcggcccccgtgcccgagccgaccatggctgaagtggatgcggccacccccggc
atcgacctggatgacgagccgccgctggacgaagattacatcgagccggacatggattcg
gcctatagctacctggacgatctcgccagcgagcacaccgccgagcctgcgcccgagccc
gaggcggaaccggccgcgatgccggccaccggcctggccctgcaatggctggagctgttc
ccgaaattgtcgatctccggcatgaccgggagcatcgcagccaactgcacgctgatcgca
gtcgagggtgatcactggctgttgcacctggacccggcccacagtgccctgttcaatgcg
actcagcagcgccggctcaacgatgccctgaaccagttccacgaacgcaccctgacggtg
accatcgagctgatcaagcccgagcaggaaaccccggcccaggccgcgacccgtcgccgt
ctcaaccgccagcgtgaggccgaggagtcgatccacgccgatccactcatccagcagatg
atggagcagtttggcgcggtggtgcgccacgatactattgagcccgtcgaagcccaggct
gcagcgggctga
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