Pseudomonas fluorescens UK4: HZ99_11620
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Entry
HZ99_11620 CDS
T03319
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZ99_11620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfn02000
]
HZ99_11620
Transporters [BR:
pfn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HZ99_11620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AIG02778
UniProt:
A0A379IIK1
LinkDB
All DBs
Position
complement(2581767..2582942)
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AA seq
391 aa
AA seq
DB search
MITLRVLGTSVTLLETLHVRAEQELGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQWFHNV
DFVWPARAIQPIDTRRIALWHEINDLPKRGRLSANDRLGSGSVPSERLFVQHDGSLGSNV
TERISMLPLTHNADSFAYRPERLPEGFCRSNESWGWLLDPALRARTALQSDAAIGALDAA
LAVQGAGLARFNDIGNMSIEEIDVLADILVRKQKEGHFAAFWSDDEEAAQLMLSPSIDIQ
SLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWPG
AVMARQGYYIGNPARSRDHLSSAEWDYWYAGLPAREELPGSDGLPLIDIGEVRDGGSYEQ
RMGHIAVWNSVMDEHNYLVRRWGDFMRARAV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgattaccctgcgtgtgctgggcacatcggtcaccttgcttgaaaccctgcacgtgcgc
gccgaacaggaactgggcatccgcctggtgtaccaggtacacgatgtggaacaggcgcaa
cgcattgcggtgatgcagccggatagctacgacctctacgaccagtggtttcacaacgtc
gattttgtatggccggcacgggcgatccagccgattgatacccggcgcatcgccctgtgg
catgaaatcaatgacctgcccaagcgcgggcgcctgagcgccaacgaccgcctgggcagc
ggcagcgtgcccagcgagcgcctgttcgtgcagcacgatggcagcctgggcagcaacgtc
accgagcgcatcagcatgttgcccctgacccacaatgccgacagttttgcctaccggccc
gagcgcttgcccgaaggcttttgccgcagcaacgaaagctggggctggttgctggacccc
gccttgcgcgcccgcaccgcactgcagagcgacgccgccatcggtgccctggatgcggcg
ctggcagtgcagggcgccgggctggcccgcttcaacgacatcggcaacatgagcatcgaa
gagattgatgtgctggctgacatcctcgtgcgcaagcagaaggaaggccatttcgccgcg
ttctggtccgacgacgaggaagcggcgcaattgatgctcagccccagtatcgatatccag
agcctgtggtcgcccaccttgatgcgcctgcatcgggccggggtcaaataccgtctggca
gtgccccgtgaaggctatcgcgcctggttcggcggcctgtcgctgtcgcgtcacgccaaa
ggcccggtgctggatgcggcctatgcctacctcaactggtggctgtcggggtggcccggc
gcggtgatggctcgccagggctattacatcggtaacccggcccgtagccgcgaccacctg
agcagcgccgagtgggactactggtacgccggtttgcctgcccgcgaagagttgccgggc
agcgatggcctgccactgatcgacattggcgaagtgcgcgatggcggctcttacgagcag
cgcatgggacatatcgcggtgtggaactcggtgatggacgagcacaactacctggtacgc
cgctggggcgatttcatgcgtgcccgggccgtttag
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