Pseudomonas fluorescens UK4: HZ99_12120
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Entry
HZ99_12120 CDS
T03319
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn00470
D-Amino acid metabolism
pfn00550
Peptidoglycan biosynthesis
pfn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HZ99_12120 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HZ99_12120 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfn01011
]
HZ99_12120 (murD)
Enzymes [BR:
pfn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HZ99_12120 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfn01011
]
Precursor biosynthesis
Amino acid ligase
HZ99_12120 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AIG02873
UniProt:
A0A379IJ14
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All DBs
Position
complement(2695583..2696929)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELVTLRRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDGIELYVMELSSFQLETTDQLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLMGEGLPCWTFGLSKPD
FKAFGIREENGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRDLEGVSYYNDSKATNVGAALAAIEGLGADIDGQLVLIAGGDGKGAD
FKDLKGPVAAHCRAVVLMGRDSDLIAAALGDGVPQVRAISLDDAIAQCRALAKPGDAVLL
SPACASFDMFKNYEERGQLFARAVEGLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgcttcagaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgccgtggccgatacgcgggaa
aatccaccggagctggtcacgctgcgccgtgactacccgcacgtggaagtgcgttgtggc
gagttggatgtcgagttcctgtgccgtgcagacgaactctacgtgagtcctggcctggcc
ctggcgaccccggcactgcaggcggcagcggcgcgtggcgtgaagttgtccggcgatatc
gagctgtttgcgcgcaacgccaaggcgcccatcgtggcgatcagcggctccaatgccaag
agcaccgtcaccaccctggttggcgaaatggcagcggcagccggcaagcgcgtggccgtg
ggcggcaacctcggtacgccggcgcttgacctgctcagcgacgggatcgagctgtacgtc
atggagttgtcgagcttccaactggaaaccaccgatcaactcggtgccgaagtggccacc
gtgctgaatgtcagcgaagaccatatggaccgctacagcggcctgccggcttatcacctg
gccaagcaccggattttccgtggtgcgcggcaagtggtggtcaaccgccaggatgccctg
agccgtccgctgatgggcgagggcctgccatgctggaccttcggcttgagcaaacctgac
ttcaaggcctttggtatccgtgaagagaacggcgagaagtacctggccttcgaattccag
aacctgatgccggtgcgtgaactgaaaatccgtggcgcccacaaccagtccaatgccctg
gcggcactggcgttggggcatgcggtcggtttgccgttcgacgcgatgctgtcgagcctg
cgcacctttgccggcctcgaacaccgctgccagtgggtgcgcgatctggagggggtgagc
tactacaacgattccaaggccaccaatgtcggtgccgcactcgccgccattgaaggcctg
ggcgccgatattgacggccagttggtactgattgccggtggcgatggcaagggggccgat
ttcaaggacctcaagggcccggtggctgcccattgccgcgctgtggtgttgatgggccgt
gacagcgacttgatcgccgccgctctgggggacggtgtgccgcaagtgcgcgccatctcc
ctggacgacgccatcgcccaatgccgcgccctcgccaagcctggcgatgctgtgctgttg
tcgccggcgtgtgccagtttcgacatgttcaagaactacgaagagcgtggccagttgttc
gctcgtgccgtggagggtttggcatga
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