Pseudomonas fluorescens UK4: HZ99_13075
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Entry
HZ99_13075 CDS
T03319
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn00260
Glycine, serine and threonine metabolism
pfn00460
Cyanoamino acid metabolism
pfn00630
Glyoxylate and dicarboxylate metabolism
pfn00670
One carbon pool by folate
pfn00680
Methane metabolism
pfn01100
Metabolic pathways
pfn01110
Biosynthesis of secondary metabolites
pfn01120
Microbial metabolism in diverse environments
pfn01200
Carbon metabolism
pfn01230
Biosynthesis of amino acids
pfn01240
Biosynthesis of cofactors
pfn04981
Folate transport and metabolism
Module
pfn_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HZ99_13075 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HZ99_13075 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HZ99_13075 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HZ99_13075 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HZ99_13075 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HZ99_13075 (glyA)
Enzymes [BR:
pfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HZ99_13075 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AIG03055
UniProt:
A0A379IJ99
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All DBs
Position
2897142..2898395
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDIVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAQAMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLSNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaagtacgccgaaggttatccg
ggcaagcgttactacggcggttgcgaattcgtcgacatcgtcgagcaactggccatcgac
cgcgccaaggagctgttcggtgccgattacgccaacgtccagccacacgccggctcccaa
gccaacgcggccgtttacctggccctgctgcaaggtggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcgtcctccggcaagctgtac
aacgctgtgcagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctcgacttcccacgtttccgtgaaatcgccgacaaggttggcgcctacctgttcgtcgac
atggctcacgtggccggtctggtggccgctggcgtctatccgaacccagtgccttacgct
gacgtcgtgacgaccactacccacaagaccctgcgcggtccccgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaaaaaactgaactctgccgtcttcccaggcgcccag
ggcggcccgctggaacacgtgatcgccgccaaggcgatctgcttcaaggaagccttgcag
cctgagttcaagacttaccagcagcaagtggtgaaaaacgcccaggccatggccagtgtg
ttcatcgagcgcggttttgacgtggtttccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagatgctgacgcagccctgggcaaagccttc
atcaccgtgaacaaaaactcggtaccgaacgacccacgttcgccgttcgtcacctcgggc
ctgcgtttcggcaccccggctgtgaccactcgtggcttcaaggaagcagagtgcaaggaa
ctggctggctggatctgcgacatcctggcagacctttccaacgaagccgtgattgacgcg
gtacgtgagaaggtcaaggccatctgcaagaagctgccggtatacggcgcttga
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