Pseudomonas fluorescens UK4: HZ99_13270
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Entry
HZ99_13270 CDS
T03319
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03030
DNA replication
pfn03430
Mismatch repair
pfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZ99_13270
03430 Mismatch repair
HZ99_13270
03440 Homologous recombination
HZ99_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfn03032
]
HZ99_13270
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_13270
Enzymes [BR:
pfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZ99_13270
DNA replication proteins [BR:
pfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZ99_13270
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZ99_13270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
Motif
Other DBs
NCBI-ProteinID:
AIG03092
UniProt:
A0A379IJA4
LinkDB
All DBs
Position
complement(2938636..2939247)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSHCRATEIAVVILEHGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPSAPNHKLGTLTSYAQLPHTGKAHRAMADAQMAANLTAHLAQELRHTHGLRELSHD
LLCSLQKVPAAKITDHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatctcgccgagcagccattgc
cgggccacggaaatcgccgtggtcatcctggagcacggccagatcgtggatcgctaccag
agcctgatgaacgccggcgtacgcgtgccggggtttatcgagcaactgacgggcatcagc
aacgccatgctgcgcagcgcaccgccggcagagcgggtgatgaacgaggtcaatgagttc
gtcggcaccacaccgctgctggcccataacgccgcgttcgaccagaagttctgggacttt
gaactgggcctgatccgccgtacccgcctgcaaaaatttgcctgctcactgctcctggca
cgccggttgatgcctagcgcaccgaaccacaaactcggcaccctgacttcctacgcccag
ttgccccacaccggcaaggctcaccgggcaatggcggacgcgcaaatggcagccaacctt
accgcccacttggcccaggaactgcgccacacccacggcttgcgcgagctgtcccatgat
ctgctgtgcagcctgcagaaagtgccggcggcgaagatcaccgatcacctgaagaaacat
cgcgggttctga
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integrated database retrieval system
