Pseudomonas fluorescens UK4: HZ99_13530
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Entry
HZ99_13530 CDS
T03319
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03030
DNA replication
pfn03430
Mismatch repair
pfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZ99_13530
03430 Mismatch repair
HZ99_13530
03440 Homologous recombination
HZ99_13530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfn03032
]
HZ99_13530
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_13530
Enzymes [BR:
pfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZ99_13530
DNA replication proteins [BR:
pfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZ99_13530
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZ99_13530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AIG03139
UniProt:
A0A379IJN6
LinkDB
All DBs
Position
2992206..2993243
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGNLAPVYIVSGDDPLLCQEAADSIRQAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA
QKTKWGKALVDGAHTQFIQIWPVDSNQLPQWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQGAVADSARFDVFGLVDAILNGEATHALRMLEGLRGE
GVEPPVILWALARELRLLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMSGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgcccccgcccaactcgccaagcacctgcaaggcaacctcgcgcctgtgtac
atcgtcagtggcgatgatccgctgttgtgccaggaagccgccgacagcatccgccaggct
gcacgccagcagggttttgatgagcgccaggtgttcagcgccgatgccagcttcgattgg
ggcaccctgctccaggccggggccagcatgtcgctgtttgccgaaaagcgcctgttggag
ctgcgcctgccttcgggcaagcccggcgacaaaggcgcagcggcgctgatggaatactgc
gcacgccctgccgaggacacgctgctgctgatcagcctgcccaagctcgatggcagtgcg
cagaaaaccaaatggggcaaggcgctggtggacggggcacacacccagttcatccagatc
tggccggtcgacagcaatcagttgccgcaatggattcgccagcgtctgtcgcaagccggg
ttgtctgccagccaggacgcggtcgagctgattgccgcgcgggttgaaggcaacttgctt
gccgccgcccaggaaatcgaaaagctcaagctgatggccgagggtggccagatcaccgtc
gagacggtccagggcgcggtggccgacagtgcacgctttgacgtgtttggattggtggat
gcgatcctcaacggcgaggcaacccacgccttgcgcatgctcgaagggctgcgcggtgaa
ggggtcgagccgccggtgattctctgggccctggcgcgggagttgcggctgctggccaat
atcgccctgcaatacagccagggcacgccattggacaaggccttcagccaggcccgcccg
ccggtatgggacaagcgcaagccactgatgagcaaagccctgcagcggcactcggcgcaa
cgctgggcgcaactgctgctggaggcccagcgcatcgatgcacagatcaagggccaggct
gccgggtcgccgtggatgagtttgagccgcttgtcgctgcttatgtcaggccagcgcctg
gcactccccgccgaataa
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