Pseudomonas fluorescens UK4: HZ99_15285
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Entry
HZ99_15285 CDS
T03319
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03030
DNA replication
pfn03430
Mismatch repair
pfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZ99_15285
03430 Mismatch repair
HZ99_15285
03440 Homologous recombination
HZ99_15285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfn03032
]
HZ99_15285
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_15285
Enzymes [BR:
pfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZ99_15285
DNA replication proteins [BR:
pfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZ99_15285
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZ99_15285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIG03452
UniProt:
A0A379IKC8
LinkDB
All DBs
Position
3336896..3337603
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFSWLRPPRPGLDEHQQARRQQLPAPGVLGDTTLRDQRWVVLDLETSGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLLRAQTKLSPSVLIHGLGPSAIAAGCDPAEALLDFMDFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLAHPFLDVADLAPLLCPQAHIREAGLDDWIAHF
NLQVGERHHASADALATAELMLILFSRARQQGLDSPAALQQRLSQWKRRQQAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgttcagttggctgcgccctccccggccggggctggatgagcatcaacaagcg
cggcggcaacaactgccagcgcccggcgtgctcggcgacactaccctgcgcgaccagcgc
tgggtggtcctggacctggaaaccagcggcctgaacctcaatcgcgaccaggtgctgtcg
attggcgcggtggtgatcgaagacggtgccatcgacttctcccagcaatttgaacgcacc
ctgctgcgggcgcaaaccaaactcagccccagcgtattgatccacggcctcggccccagc
gcgatcgccgccggttgcgatccagccgaggcgttgctggacttcatggactttgtcggc
gacagcccgctgctcgcgttccatgcgccgttcgaccagcacatgctcggccgggcgctc
aaggacagcctgggttaccgcctggcccatccgttccttgatgtggcggacctggcgccg
ctgctgtgccctcaagcgcatattcgcgaagcgggactggatgactggatcgcccacttc
aacctgcaagtcggtgaacgccatcacgccagcgccgatgccctggccaccgctgagttg
atgttgattctgttcagccgcgcccgccagcaagggctcgacagccccgcagcgttgcaa
cagcgcctgagccagtggaaacgtcgccagcaagccccgtccttctaa
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