Pseudomonas fluorescens UK4: HZ99_15985
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Entry
HZ99_15985 CDS
T03319
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfn03021
]
HZ99_15985
Transcription machinery [BR:
pfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HZ99_15985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AIG03590
UniProt:
A0A075P9L6
LinkDB
All DBs
Position
complement(3482485..3483339)
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctctggtcccaggcgcgaacctggaagcctat
gtgcacacggtcaacagcattcctttgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctatagcggctacggcctggcccaggctgacctgatc
caggaaggcaacgtcggcctgatgaaggctgtaaagcgcttcaacccggaaatgggtgtg
cgcctggtctcgttcgctgtgcactggatcaaggcggaaatccacgagttcatcttgcgc
aactggcgcatcgtgaaagtggcgaccaccaaggcccagcgcaaattgttcttcaacctg
cgcagccagaagaagcgcctggcgtggctgaacaacgaggaagtccaccgcgtggccgaa
agcctcggcgtggagcctcgggaagtgcgtgagatggaaagtcgcctgaccggccatgac
atggccttcgacccggccgctgaagcggacgacgacagtgctttccaatcgccggccaac
tacctggaagaccaccggtacgacccggcgcgtcaactggaagatgccgattggagcgac
aactccaaccacaacctgcacgaagcactggaagtgctggacgaccgcagccgtgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacctggcgcaaaagtac
aacgtgtcggccgagcggattcgtcagcttgagaaaagcgcgatgaacaagctgaaactg
tcgatcgccgcctaa
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