Pseudomonas fluorescens UK4: HZ99_20135
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Entry
HZ99_20135 CDS
T03319
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZ99_20135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_20135
Enzymes [BR:
pfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZ99_20135
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZ99_20135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
HypA
Zn_ribbon_6
PIF1
iSirtuin
TrwB_AAD_bind
WHD_PriA
AAA_22
Zeta_toxin
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AIG04378
LinkDB
All DBs
Position
complement(4403736..4405955)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVVRSQLQPGMRVRVPFGRREMIGILIEVADHSEVP
PEKLKPALAILDATPPLPASLFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAETRQER
FWSITPGARLDDPRIARAPRQREVLATLAQHPHGVAHPLLSKLMLSKDSLDLLLAKDLVQ
VEIRRHAPGERHEHWLAQPELPLNPEQRAAFEAISASADSFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECNRCDARMTVHQRSAELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDFPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSVAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATARAPLHRLLSSWLLALEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctcgccctgccctcgcccctgcgccgcctgttcgactat
cgggcacccgcgggcgtggtgcggtcgcagttgcagccggggatgcgcgtacgcgtgccg
ttcggccgacgggagatgatcgggatcctgatcgaagtggcggatcatagcgaagtgcca
ccagaaaagctcaagccggccctggccatcctggacgccacgccgccgctgccggcgtcg
ctgttcaagctgtgcctgtggacttcccagtattaccagcacagcctgggcgatacgttg
agctgggcattgccggtgctgttgcgccagggcgagctggccgagacccgccaggagcgc
ttctggtcgataacgcccggtgcacgcctggacgacccacgtatcgcccgcgccccacgc
cagcgcgaggtcctggccacactggcgcagcacccccatggcgttgctcacccactgctg
agcaaactgatgttgagcaaggacagcctcgacctgctgctggccaaggacctggtgcag
gtggaaatccgccgccacgcccccggcgagcgccatgaacactggctggcccaaccggag
ctgccgctgaacccggaacagcgcgccgcgttcgaggccatcagcgccagcgccgacagc
ttccacgcattcctgctggccggcgtcaccggcagcggcaagaccgaagtctatttgcaa
ttgatccgcgaaaccctggaagccggcaagcaggccctggtgctgatccccgagattaac
ctcggcccccagaccctggcgcgcttcgaacaacgcttcaatgcgcggatcgccctggtg
cattcggccgtcaatgaccgcgagcgcctggaatcctggctggccgcccgggacggcgag
gccgacattattatcggtacccgctcggccctgttcacgccgatgaaaaaccccggcctg
atcatcatcgacgaagaacacgacggctcctacaaacagcaggaaggcctgcgctaccac
gcccgcgacctggccctggtgcgcgcacgccaggaaaacattccgattgtgctgggctcg
gccacgccctccctggaaagcctgcataacgcgtacaccggacgctacggcctgctgcgc
ctgaacgaacgggcgggcggggccaaacaaccgcgcttcctgcgcctggatgtaaaaagt
cgcccactcgacagcggcatttccgggccgatgcaacaggccatcggccagaccctggcg
gccggccagcaagtgctggtgttcctcaatcgccggggctttgcgccgacactgctgtgc
cacgactgtggctggatgtccgagtgcaaccgctgcgatgcgcggatgaccgtgcaccag
cgctccgccgaattgcgctgccatcactgcggccatgtggagcgggtcccgcgtcattgc
ccgcagtgcggcaaagtcgacctgcggccagtaggcgcgggcaccgaacgcgccgaggag
cgcctggggattctgttcccggacttcccggtactgcgcgtagaccgcgacagtacgtcg
cgcaaggacgccatgaaccaactgttcgccaccatccagaaaggccagccgtgcattttg
gtaggcacgcaaatgcttgccaaagggcaccactttccacgtgtgaccctggtctcgatc
ctggatgccgacggcgggctgttctccggcgactttcgcgccagcgaacgcatggcgcag
ttgatcgtgcaggttgctggccgcgccgggcgtgccgaggagcctggccgagtgatcatc
cagacccacctggccgaccatccattgctgattcaactgacagaacaaggctattttgcc
ttcgccgaacaggccttgagcgaacgtcgcgcagccggcctgccaccctttgcgcacctg
gcgctgttgcgcgccgaggcccataaaccggggcaggccgaaggttttctggatgaggcc
tgcagcgtggctgaacgtttgctcggtgaactgggtctgagcggcatcgagttgctgggc
ccggtgccagcaccgatggaacgccgcgccggacgttatcgcgcgcagctactcttgcaa
gccaccgctcgtgcaccgctgcatcggctattaagtagctggttacttgctctggagcaa
atgcccagcggacggcaggtgcgatggtcgttggatgtcgatccggtcgatttgtactga
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