Pseudomonas fluorescens UK4: HZ99_22325
Help
Entry
HZ99_22325 CDS
T03319
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZ99_22325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfn03019
]
HZ99_22325
Enzymes [BR:
pfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HZ99_22325
Messenger RNA biogenesis [BR:
pfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HZ99_22325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AIG04780
UniProt:
A0A379I8M1
LinkDB
All DBs
Position
complement(4889662..4891059)
Genome browser
AA seq
465 aa
AA seq
DB search
MLKKLFQSFRSPLRRTQHIRSTPEVLNSNQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPTQRYQEDPVRMLRAVRFAAKLNFGIEKHTAAPIRELAPMLREIPSA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASADALEHNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQNRGMPPIPAIQEAAHELITEQCQRIAIPKRF
TLPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERREMIRELSSKGEATGEGPKKRRRSSGSKRKRSAADTSGE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttcccccttgcgtcgtacgcaacacattcgc
agcacgcctgaagtgctcaacagcaatcaacattcgctgcagcgcgcccagttcagccgt
tatgcggtgaacatcgtcgaacgcctgcagaacgccggctatcaggcctacctggtcggc
ggttgcgtgcgcgacatgttgctcaacatcactcccaaggatttcgacgtcgccaccagc
gccacgccagaacaagtgcgcgccgagtttcgcaacgcacggatcatcgggcggcgcttc
aagttggtgcatatccactttggccgcgagatcatcgaggtcgcgaccttccgcgcaggc
cacccgcaaaacgatgaagaggaagacagcaaccagtcctcccgcaacgaaagcggacgt
atcctgcgcgacaatgtgtatggcaccctggaagaagacgcgcagcgccgcgatttcacc
atcaatgccctctattacgatccggtcagcgaacgcatcctcgattacgccaacggcgtg
cacgatattcgcaatcatctgatccgcctgatcggcgaccctacgcagcgctaccaggaa
gacccggtgcgcatgctgcgggccgtgcgctttgccgccaagctgaacttcggtatcgag
aaacacacggccgcgccaattcgcgaactggcgccgatgctgcgggaaatcccctcggcg
cgcctgttcgaggaagtgctcaagctgttcctttccgggcatgcggccgacacgtttgaa
atgctggtggacttgcagttgttcgacccactgttcccggccagcgccgacgcactggag
cacaatccgacatacacccacacgctgatcagcgaagcgttgatcaacactgacctgcgg
atcaaacagaacaaaccggtcaccccggcattcctgtttgccgccctgctctggcctgcc
ttgccagcccgggtgctgcgcctgcagaaccgtggcatgccgccgattccggcaatacag
gaagccgcgcacgaactgatcaccgaacagtgccagcgcatcgcgatccccaagcgtttc
accctgccgatccgcgagatctgggacatgcaggaacgtctgccacgacgcagtggcaaa
cgtgccgatctgctgctggacaacccgcgcttccgtgccggctatgacttcctgctgctg
cgtgaaagcgccggcgaacagaccgatggcctgggcgaatggtggaccgactaccaggac
gccaatgacagcgaacgtcgcgagatgattcgtgagctcagcagcaaaggcgaagccact
ggcgaggggccgaaaaaacgccgccgcagcagtggcagcaaacgcaagcgcagtgccgcc
gatacctctggcgaataa
DBGET
integrated database retrieval system
