Pseudomonas fluorescens UK4: HZ99_22865
Help
Entry
HZ99_22865 CDS
T03319
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_22865
Enzymes [BR:
pfn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HZ99_22865
DNA repair and recombination proteins [BR:
pfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HZ99_22865
Prokaryotic type
HZ99_22865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
AIG04877
UniProt:
A0A379I8Q8
LinkDB
All DBs
Position
complement(5000812..5002257)
Genome browser
AA seq
481 aa
AA seq
DB search
MHLTWLRSDLRLHDNTALAAACQRGPTAAVYLITPGQWLAHDDAPCKVDFWLRNLKCLGQ
ALGELNIPLLIRHADTWDQVPQVLVELCRALSVETVHANEEYGINESRRDVAVARALEAQ
GVGFHSYLDQLLFQPGSVLTQTGTYFQVFSQFRKVCYNRLHSALPRRVSAPKAQAPLRLA
SDAVPRQVKGFAPPSDALRALWPAGEDEAQRRLGQFADAQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQSNQGEFESGDIGATTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRHAPADLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSQKFDGEGRFIK
QWLPQLAALNKKEVHNPDAVGGLFGVADYPRPIVDLKHSRERALAAFRALPSRQAAGGVH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgcagcgacctgcgcctgcatgacaacaccgcccttgcggcc
gcctgtcaacgtggccccacggcggcggtgtacctgatcacccctgggcaatggctggcc
catgacgacgcgccgtgcaaggtcgacttctggctgcgcaacctcaagtgcctgggccag
gccctgggtgagctgaatatcccgttgttgatccgccacgcggatacctgggatcaggtg
ccacaggtattggtcgagttgtgtcgggccttgtcggtcgagacggtccacgccaacgaa
gagtacgggatcaacgaaagccggcgtgatgtcgccgtggcccgggccctcgaagcacaa
ggggtaggctttcacagctatctggatcaattgctgttccaacccggcagtgtgctgacc
cagaccggcacctacttccaggtgttcagccagtttcgcaaggtctgctacaaccgcctg
cacagtgccttgccgcgccgggtatcggcgcccaaggcccaggccccgctgcgattggcc
agcgatgcagttccccggcaggtcaagggatttgccccgcccagcgacgccctgcgtgca
ctttggcctgccggtgaagacgaggcacagcggcgcctggggcaattcgccgacgctcag
atcagctactacaaggacgaacgcgacttcccggccaagcctggcaccagccagctgtcc
gcgtaccttgccgcaggcgtggtttcgccgcgccagtgcctgcatgccgcgctgcagagc
aaccagggtgagttcgaaagtggcgatatcggcgcgaccacctggatcaacgagctgcta
tggcgcgagttctacaaacatatcctggtgggctacccacgggtgtcgcgccatcgcgcg
tttcgcccggaaaccgaagccgtggcctggcgccatgcacccgccgacctggccgcctgg
caagaggcccgcaccggcctgccgatcatcgacgcggcgatgcgccagttgctggaaacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcctgaccaagaaccttttg
atcgactggcgcgaaggcgagcgcttctttatgcggcacttgatcgacggcgacctggcg
gccaacaacggcggttggcaatggagttcgtccaccggcactgactcggcgccgtacttt
cggattttcagcccgctgagccagtcgcaaaaattcgacggcgaagggcgtttcatcaag
cagtggctgccgcaactggcagccttgaacaagaaggaagtgcataaccccgacgccgtc
ggcggtctgtttggcgtggccgactacccacggcccatcgtcgatctgaagcattcccgt
gagcgagcgttggcggcctttcgcgccctgccctcgcgccaggcggcgggaggcgtgcat
gagtga
DBGET
integrated database retrieval system
