Pseudomonas fluorescens UK4: HZ99_24085
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Entry
HZ99_24085 CDS
T03319
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn00300
Lysine biosynthesis
pfn01100
Metabolic pathways
pfn01120
Microbial metabolism in diverse environments
pfn01230
Biosynthesis of amino acids
Module
pfn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HZ99_24085
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfn01002
]
HZ99_24085
Enzymes [BR:
pfn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HZ99_24085
Peptidases and inhibitors [BR:
pfn01002
]
Metallo peptidases
Family M20
HZ99_24085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AIG05103
UniProt:
A0A379I9I1
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All DBs
Position
complement(5260217..5261368)
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AA seq
383 aa
AA seq
DB search
MTVHADLSPTLQLAIDLIRRPSVTPIDADCQKLMMQRLGDAGFALEPMRIEDVDNFWATH
GKHEGPVLCFAGHTDVVPTGPVHAWQNDPFDALIDEHGMLCGRGAADMKGSLAAMLVAAE
RFVKDYPDHKGSVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGATLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNTFFPPTSFQ
ISNLNSGTGATNVIPGDLTAVFNFRFSTESTVEGLQQRVAAILDKHGLDWHVEWALSGLP
FLTEPGALLDAVSASIKAITGRETRASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggtccatgccgacctttcgccgaccctccaactcgctatcgacttgatccgccgt
ccgtcggtgacgccgatcgacgccgactgccagaagctgatgatgcagcgcctgggcgac
gccggctttgcgcttgagcccatgcgcatcgaggatgtggacaacttctgggccacccac
ggtaagcatgaaggcccggtgctgtgttttgccggccataccgacgtggtcccgaccggc
ccggtgcacgcctggcagaatgacccgttcgacgcgctgatcgacgaacacggcatgttg
tgcgggcgtggcgcagccgacatgaaaggcagcctggccgccatgctcgtggcggccgag
cgttttgtgaaggattacccggaccataagggttcggttgccttcctgatcaccagcgat
gaagaaggcccggcacaccacggcaccaaggccgtgatcgagcgcctggcagcccgcaag
gaacgcctggactggtgcatcgtcggcgaaccgtcgagcaccaccctggtgggcgatgtg
gtcaagaatggccggcgtggctccctcggtgcgaccctgaccgtacgcggcgtgcaaggc
catgtggcctacccgcacctggcaaagaacccgatccacctggctgccccggccctggcc
gaactggccgccgagcattgggacgacggcaataccttcttcccaccgaccagcttccag
atttccaacctcaattccggcaccggcgccaccaatgtgatccccggtgacctgacggcg
gtgttcaacttccgcttctccaccgagtccaccgtcgaaggcctgcagcagcgggtcgcg
gcgattctcgacaagcatggcctggactggcatgtggagtgggcgctgtcgggcctgccg
ttcctcaccgaaccgggcgcgctgcttgatgcggtgtctgccagcatcaaggccatcacc
ggccgcgagacccgggcctccaccagcggcggcacgtccgacgggcgctttatcgcgacc
ctcggtacccaagtggtggaactgggcccggtcaacgcgacgatccatcaggtcaacgag
cgcatcctcgccagcgacctcgatgtattgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
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