Pseudomonas fluorescens UK4: HZ99_24280
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Entry
HZ99_24280 CDS
T03319
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfn03016
]
HZ99_24280
Enzymes [BR:
pfn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HZ99_24280
Transfer RNA biogenesis [BR:
pfn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HZ99_24280
Prokaryotic type
HZ99_24280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIG05142
UniProt:
A0A379I9F0
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All DBs
Position
5306430..5307488
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGDALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAQNDTLKILKTARHKR
KLQRGAHAANGFTLRLTQLAGDQAAIDARLQLIAKHGIPNYFGSQRFGHDGGNVVDARDW
AARKALPEQRNVRSRLLSSARSFLFNKVLAARVVDGSWQRAQVGDLLAFTDSRSFFPAGE
AQCSDPRLAILDLHPTGPQWGEGDSPATGATHELEQAVAASEADLCDWLAKAGMSQERRI
LRLPIGGLTWHYPETDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgttgggcccgcgggcttatggcgacgcgctgggcagtgctgtg
ctcaaggcgactgccgaagatttccaggtggacgaggtgctggatatcccgctgaccggc
gagggtgagcacctctggctgtgggtggaaaagcgtggcctgaacaccgaagaggccgcg
cggcgcattgccaaggccgctggtgtgccgttgcgcaccgtcagctatgccggcctcaag
gaccgccaggcgctgacgcgccagtggttcagcgtgcaactgccgggcaaggccgatccc
gacctgagtgcggcgcaaaacgacacccttaagatcctcaagaccgcccgccacaagcgc
aagttgcagcgtggcgcgcatgcggccaacggttttaccctgcgtctgacccaactggct
ggcgatcaggccgctatcgatgcgcgcctgcaattgattgccaagcacggtatccccaac
tatttcggctcccagcgatttggccatgacggtggcaacgtcgtcgatgcccgtgactgg
gcggcccgcaaggccttgccggagcagcgcaatgtgcgttcgcgcctgctgtcgagtgca
cgtagcttcttgttcaataaagtgctggcggcgcgggttgtcgacggttcgtggcagcgc
gcccaggtcggtgacctgctggcattcaccgatagccgcagttttttcccggccggtgag
gcgcagtgcagtgacccacgcctggcgatcctcgacctgcatcccaccggcccgcaatgg
ggtgaaggcgattctcccgccactggcgccacccatgagctggagcaggctgtcgcagcg
agcgaggcagatctgtgcgattggctggccaaagccggcatgagccaggaacgtcgcatt
ctgcgactgcccattggcgggttgacgtggcattatcccgagactgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgtcttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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