Pseudomonas fluorescens UK4: HZ99_24300
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Entry
HZ99_24300 CDS
T03319
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfn03021
]
HZ99_24300
Transcription machinery [BR:
pfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HZ99_24300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AIG05146
UniProt:
A0A379I9W0
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All DBs
Position
5310053..5311057
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AA seq
334 aa
AA seq
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MALSKEAPEFDIDDEVLLMETGIGTESMSNEGPAVPSVRTKSKNSTALKQHKYIDYTRAL
DATQLYLNEIGFSPLLTPEEEVHFARLSQKGDPAGRKRMIESNLRLVVKIARRYVNRGLS
LLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKEL
NVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVIRRFGLRGHESSTLEDVGLEI
GLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagcgccggagtttgacatcgacgatgaggttctccttatggag
accggcatcggtacggaatcgatgtcgaatgagggacccgctgtaccttcagttcgtacc
aagtccaaaaactccacagcgttaaaacagcataagtatattgattacacccgggcgctt
gatgcgacccagttgtacctcaatgaaatcggcttttcccccttgctcactcccgaagaa
gaagtccattttgcgcgattgtcgcaaaagggcgatccggctgggcgcaagcgcatgatt
gaaagcaacctgcgcctggtggtgaaaatcgcccggcgctacgtcaatcgtgggctgtcc
ctgttggacctgatcgaagagggcaacctcggcctgatccgggcagtagagaagtttgac
cccgagcggggttttcgcttctcgacctacgctacgtggtggattcgccagactatcgaa
cgggcaatcatgaatcagacccggaccatccggttgccgattcatgtcgtcaaggagctg
aacgtctacctgcgggcagcacgtgagctcacccagaaacttgatcatgaaccttcgcct
gaagagatcgccaacctgctggaaaaaccggtgggagaggtcaagcgcatgctgggtctc
aatgagcgtgtgtcttcggtcgatgtctcgctgggtccggattcggataaaaccctgctg
gacacccttacggatgaccgtccaacggatccgtgcgagctgttgcaggacgatgacttg
tcacaaagcatcgaccaatggctttcggagctgacggacaagcagcgcgaggtggtgatt
cgccgcttcggcttgcgtggccatgaaagcagcactttggaagatgttggtctggagatc
ggcttgacccgtgagcgggtgcggcagatccaggtagagggtctcaagcgcttgcgggag
atcctggagaagaatggtttgtcgagtgagtcgttgtttcaataa
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