Pseudomonas fluorescens UK4: HZ99_24920
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Entry
HZ99_24920 CDS
T03319
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZ99_24920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_24920
Enzymes [BR:
pfn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HZ99_24920
DNA repair and recombination proteins [BR:
pfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HZ99_24920
Prokaryotic type
HZ99_24920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIG05266
UniProt:
A0A379I9R3
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All DBs
Position
5438595..5439287
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AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKHALREEFEQPYMTELREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPSHGCLQSWA
DQGVLLLNTTMTVERANANAHAGKGWQFFTDRIIEVVSQHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGEMPIEWRLPPI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgacgaccgtatcaaactcgaaccgagctggaaacacgccctgcgcgaggag
ttcgagcagccgtacatgactgaactgcgcgagttcctgcgccaggagcatgcggcgggc
aaggaaatctacccgccggggccgctgatcttcaatgcgctcaactccacgccgctggac
aaggtcaaggtggtgatcctcggccaggacccgtaccacggcccgggccaggcccatggc
ctgtgcttctcggtgcaaccgggcgtgccgacaccgccgtcgctggtcaatatctataaa
gaactcaagcgcgacctcaacatcgacatccccagccacggctgcctgcaaagctgggcc
gaccagggcgtgttgctgctcaacaccaccatgaccgtggagcgtgcgaatgccaatgct
catgcgggcaagggctggcagttctttaccgataggattatcgaggtggtcagccagcac
caaccgcacctggtgttcctgctgtggggcgcccatgcccagggcaagcagaagctgatc
gatgcgaccaaacatttggtactgacttcggtgcacccgtcgccgttgtcggcgtatcgc
gggttcttgggctgcgggcatttcagccgcaccaacaagtttcttgagcaaaatggcgag
atgccgatcgagtggcggttaccgccgatctaa
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