Pseudomonas fluorescens UK4: HZ99_25535
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Entry
HZ99_25535 CDS
T03319
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pfn
Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfn03009
]
HZ99_25535
Enzymes [BR:
pfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HZ99_25535
Ribosome biogenesis [BR:
pfn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HZ99_25535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
TRAM
Cons_hypoth95
MTS
PCMT
Methyltransf_11
Methyltransf_23
Methyltransf_15
RrnaAD
Methyltr_RsmB-F
TRM5-TYW2_MTfase
Methyltransf_4
Ubie_methyltran
DREV
Motif
Other DBs
NCBI-ProteinID:
AIG05383
UniProt:
A0A379IAL4
LinkDB
All DBs
Position
5570896..5572248
Genome browser
AA seq
450 aa
AA seq
DB search
MAKQERGLRFQPTGGNRAPQIPVGKKQRLTIERLANDGRGIVFFEGRTWFVVGALAGEEV
EARVLGAHGKVVEARTERVFKGSELRRPAPCAHVGRCGGCSLQHLPHDEQLALKQRMLAE
QLSRVAGVEPQEWAAPLSGPEFGYRRRARVAVRYDVKAKHLDVGFRAVASQDIVAIDDCP
VLVQALQPIMQRLPNMLRRLSKPQALGHVELFSGSSIAVLLRHMAPLSDADLLVLQEFCA
FHDAQLWLHGEGEPQPFAAGQALGYRLQQWDLELAYRPGDFMQVNAGVNEAMVAQALDWL
APRSDERVLDLFCGLGNFALPLARQVREVVAVEGVQAMVDRAAVNAASNDLHNVQFFQAD
LSQPLSDAQWAKAGFCAVLLDPPRDGALEVVRKLATLGADRLVYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEAS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaagagcgaggcctgcgtttccagccaacgggcggtaatcgggcgccacaa
atcccggtcggcaagaagcagcgcctgaccatcgagcgcctggccaacgatggccggggg
atcgtgtttttcgaaggccgtacctggtttgtcgtgggcgccctggccggtgaagaggtc
gaggcgcgggtgctgggggcccatggcaaagtggtcgaggcccgtaccgaacgggtattc
aagggcagcgaactgcgccgcccggcgccgtgcgcccatgtgggccgttgtggcggttgc
agcctgcaacacttgccccatgacgaacagcttgccctgaaacagcgcatgctcgccgag
caattgtcccgtgttgccggggtcgagccccaggaatgggcagcgccgttgagcgggccc
gagttcggctatcgccgccgggcccgagtggccgtgcgctatgacgtcaaggccaagcac
ctggacgtgggttttcgtgccgtggccagccaggacattgtggccatcgatgattgcccg
gtgctggtacaggccttgcaaccgatcatgcagcgcctgcccaatatgttgcggcgcctg
agcaagcctcaggccctggggcatgtggagctgttcagtggctcgtcgattgccgtgttg
ctgcggcatatggcgcccctgtcggatgccgacctgttggtgctgcaagagttctgcgct
ttccatgacgcccagttgtggctgcatggagagggcgagccgcagccgttcgcggccggg
caggccctgggctatcgtctgcagcagtgggacctggagctggcttatcggccgggagat
tttatgcaggtcaatgccggggtcaacgaggcgatggtggcccaggcactggattggctg
gcaccgcgatccgacgaacgggttctggacctgttctgtggcctgggcaactttgccttg
cccctggcgcgccaggtgcgcgaagtggtggcggtagaaggcgtgcaggcgatggtggac
cgcgcggctgtgaatgcagcgagcaatgatttgcataatgtgcagttttttcaggccgat
ttgtcccagcctttgagtgatgcgcaatgggccaaagcaggcttttgtgcggtactcttg
gacccaccccgcgatggtgccctggaggttgtgcgcaagctcgccactctgggggctgat
cgcctggtgtatgtgtcctgcaatccagccacgctggcgcgggacactgtcgagttggtc
aaacaaggctaccggctaaaacgtgccgggatcctcgatatgtttccgcagactgcgcat
gtcgaggcgatggcgttatttgaggcgagctag
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