Pseudomonas fluorescens UK4: HZ99_26220
Help
Entry
HZ99_26220 CDS
T03319
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn00020
Citrate cycle (TCA cycle)
pfn00190
Oxidative phosphorylation
pfn00650
Butanoate metabolism
pfn00720
Other carbon fixation pathways
pfn01100
Metabolic pathways
pfn01110
Biosynthesis of secondary metabolites
pfn01120
Microbial metabolism in diverse environments
pfn01200
Carbon metabolism
Module
pfn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfn_M00149
Succinate dehydrogenase, prokaryotes
pfn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HZ99_26220 (sdhA)
00650 Butanoate metabolism
HZ99_26220 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HZ99_26220 (sdhA)
00720 Other carbon fixation pathways
HZ99_26220 (sdhA)
Enzymes [BR:
pfn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HZ99_26220 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AIG05519
UniProt:
A0A379IAJ5
LinkDB
All DBs
Position
5710526..5712298
Genome browser
AA seq
590 aa
AA seq
DB search
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVPTNIHGQAITQNAEGVDEIIHGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYDDATDANIEAALARLNALNERTDGEDVATLRRELQSCMQNYFGVFRTGE
YMQKGIAQLADLRKRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttcttttgacgccatcattattggtggtggcggcgccggc
atgcgcgctgcgctgcagctggcccagggcggccacaagacggcggtgatcaccaaggtg
ttcccgacccgttcccacactgtatcggcccagggtggcatcacctgcgcgatcgcgtct
gcagatccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactat
atcggcgaccaggacgctatcgagtacatgtgtcaggaaggcccggctgcggtgttcgag
ctggaccacatgggtctgccgttctcccgtaccgagcagggtcgtatctaccagcgtcca
ttcggcggtcagtccaaggattacggtaagggtggccaggctgcccgtacctgcgcggca
tccgaccgtactggtcacgcactgctgcacaccctctatcagggcaacctgaaagccggc
accacgttcctgaacgagtactacgcagttgacctggtgaaaaaccaggacggcgcattc
gtcggcgtgatcgctatctgcatcgaaaccggtgaaaccacctacatccgcgccaaggct
accgttctggcgactggcggtgcaggtcgcatctacgcttcgaccaccaatgccctgatc
aacaccggcgacggcgttggcatggcgctgcgtgctggcgttccggtacaagacatcgaa
atgtggcagttccacccgaccggtatcgccggcgccggtgtactggttacggaaggttgc
cgtggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgcgaaagaccttgctggtcgtgacgttgttgcccgttcgatggttaaagagatt
atcgccggtaacggctgtggcccgaatggcgaccacgtactgttgaagctcgatcacttg
ggcgaagaagtgctgcacagccgtctgccaggtatctgcgagctgtccaagactttcgca
cacgttgacccggtggttgctccggtgccagtggttccaacctgccattacatgatgggc
ggcgtgccgaccaacatccatggccaggcaatcacccagaacgccgaaggcgtggacgag
atcattcatggtctgttcgctgtgggcgaagtggcttgtgtatcggtgcacggtgccaac
cgtctgggtggcaactcgctgctcgacctggtggtattcggccgtgctgctggcctgcac
ctggaaaaggcgctgaccgatggcatcgaatacgatgacgccaccgacgccaacatcgag
gctgccctggcacgcctgaacgctctgaacgagcgcactgatggcgaagacgtggctacc
ctgcgtcgtgagctgcaaagctgcatgcagaactacttcggtgtgttccgtaccggcgaa
tacatgcagaagggtatcgcccagctggctgatctgcgcaagcgtatcgccaacgtcaag
atcaacgataagagccaggcgttcaacaccgctcgtatcgaagcccttgagctgcagaac
ctgctggaagtggccgaagcgaccgcaatcgctgccgaggttcgtaaagaatcccgtggt
gcccacgcccgtgaagactttgaagatcgcgatgacgaaaactggttgtgccacaccctg
tacttcccgggtgacaagcgcgtaaccaagcgtgccgtgaacttctcgccgaagacggtt
ccgacgtttgaaccgaagattcggacttactaa
DBGET
integrated database retrieval system