Pseudomonas fluorescens Pf0-1: Pfl01_0123
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Entry
Pfl01_0123 CDS
T00283
Symbol
fecI
Name
(GenBank) putative sigma 24 factor, FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pfl01_0123 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfo03021
]
Pfl01_0123 (fecI)
Transcription machinery [BR:
pfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pfl01_0123 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_29
HTH_23
GerE
HTH_24
FeoB_Cyto
HTH_40
HTH_11
ExsD
HTH_Tnp_ISL3
PapC_N
Motif
Other DBs
NCBI-ProteinID:
ABA71867
LinkDB
All DBs
Position
complement(131823..132371)
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AA seq
182 aa
AA seq
DB search
MTMRLIIICDVRAVAFMSSSEFAVQALYSSHHGWLNGWLRARLGNAADAADLAQDTFVRL
LQRTERLELKAPRAFLRTVARGLVIDHWRREEIERAYLETIAHLPEAETPSGESRALVIE
LLEGIARMLEGLKPKVRQAFLLAQCEGLTHKQIAEQMGLSLRSVERYVADALFHCYVLRY
EN
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgcgactaattatcatttgtgacgttcgggctgtcgcgttcatgtcctcatct
gagtttgcagtacaggcgctttacagtagtcatcacggctggctcaacggctggttgcgc
gcgcgactgggcaatgccgccgatgcggcggatctggctcaggacacgttcgtgcgtttg
ctgcaacgcaccgagcgtctggaactcaaggcacctcgcgcattcttgcgcacggttgcc
cggggtttggtgatagatcattggcgccgtgaagaaattgagcgcgcctatctggaaacc
atcgcccatttgcctgaagccgaaaccccaagtggcgaatcccgcgcattggtgatcgaa
ctgctcgagggcattgcccgcatgcttgaaggcctgaagccgaaagtgcgtcaggcattt
ctgctggcgcagtgcgaaggtttgacccacaagcagatcgccgagcagatgggactgtct
ctgcgctcggtagaacgctacgtcgccgacgccctgtttcactgctacgtgctgcggtac
gaaaactga
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