Pseudomonas fluorescens Pf0-1: Pfl01_0177
Help
Entry
Pfl01_0177 CDS
T00283
Symbol
hmsH
Name
(GenBank) poly acetylglucosamine porin
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
pfo
Pseudomonas fluorescens Pf0-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_11
TPR_14
TPR_1
TPR_16
TPR_2
TPR_17
TPR_7
TPR_8
TPR_15
TPR_12
TPR_6
TPR_9
DUF6484
Noelin-1
Motif
Other DBs
NCBI-ProteinID:
ABA71921
UniProt:
Q3KJY5
LinkDB
All DBs
Position
212850..215330
Genome browser
AA seq
826 aa
AA seq
DB search
MPRIDGPVLHRGLRPLFRVALCSQLLWPAFAFADTAYDQMVLDARAGHYTPALSVLRQVP
PAQASTGQVSDHLQIASWAGLDAEVVQVYETQGRERALPVQALTATARAYRNLKRWDQAI
QVYNKALTLEPDNADLQLGLALTQADSGKPDEGVIRARSLVAAKPDDPSRRLALGYALNR
AGKPYDALFEYDQAFIRAGNKPEVAREYVVALQKARLPEPALRLARQRPGLIDPVTLRRL
AGDLAAERVRLAELATRSEKERYVIADRALADYDQLLATWTPDATAHDDVTRWRIDRLGA
LKARARTAEVISEYQKLQAEGVKIPTYALRWVAASYLDQRQPEIATDLYRQVLAAPDADV
GDRLEDTTALYYSLLESDRAEEARKVAEDQASAQKPRVELKGLPIGNPNDEWMDAQQLAA
QAGTYGSDLPHGEERLQTLVDQAPGNIGLRLAQADLYLARNWPRRAENQLKETESIAPRD
TGLEVAQARTAMDLQEWRQMDALTDDVVARFLDNRQVQRLAREREVHDMSELRVEAYGGK
ANGGSGGDAGAVSGSRDFGIQTTLYSPPIDEDWRVFAGAGYATGDFAEGTGHHRFQRVGL
ERRTRDMTLEAEVSNHSYGFGDKQGARLAIARDINDHWQYGGSLEYLSAETPLRALNSDI
KANGGSGFIRWRANESREWRLAVSPSHFSDGNNRVEALLTGKEGVYSAPNLQVDAGLEVG
TSHNSKSDDVPYFNPKSDFSVMPLLNVNHVLYHRYETAWSQQFQAGAGTYSQRDHGTGGM
ALLGYGQRYAWNDVFEVGGLFSVINRPYDGDRETDLRLLVDLTFRF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtattgatggtcctgtattacatcgtggtttacgccctttgtttcgagtcgcg
ctgtgcagccagttgctctggccggcgttcgcgttcgccgacacggcctacgatcaaatg
gtgcttgacgcccgggccgggcattacacgcccgcgctgagcgtgttgcgtcaggtgccg
ccggcccaggccagcaccggccaagtcagcgatcacctgcaaatcgccagttgggccggg
ctcgacgccgaagtggtgcaggtctacgagactcagggccgtgagcgtgcactgccggtt
caggcgctgaccgccaccgcccgggcctaccgcaacctgaaacgctgggatcaggcgatc
caggtctacaacaaggccctgacgctggagccggacaacgctgacctgcaactcggtctg
gcgctgacccaggccgactccggcaagcctgacgaaggcgtgatccgcgcccgttcgctg
gtcgccgccaaacccgatgatccttcccgccgactggcgctgggctacgccctgaatcgc
gccggcaagccgtacgacgcgctgttcgaatacgaccaggccttcatccgcgccggcaac
aaacccgaggtcgcccgcgaatacgtggtcgccctgcaaaaggcgcgtctgccggagccg
gcgctgcgtcttgccagacagcgtccggggttgatcgatccggtcaccttgcggcgtctg
gcaggcgatctggccgctgaacgcgtgcgcctcgccgaactggccacccgcagcgaaaaa
gaacgctacgtgatcgccgaccgcgccctggccgactacgaccagctcctcgccacctgg
actccggacgccaccgcccacgacgacgtgacccgctggcgcatcgaccgcttgggcgca
ctcaaggcccgagcgcgcaccgccgaagtcatcagcgaatatcagaagctgcaagccgaa
ggcgtgaagatcccgacctacgccctgcgctgggtggcggcgtcctatctggatcagcgc
cagccggaaatcgccaccgatctctaccgtcaggtgctggcagcgccagatgccgatgtc
ggtgaccgactcgaagacaccacggcgctgtattactcgctgctggaaagcgaccgcgct
gaagaggcgcgcaaagtcgctgaagatcaggccagtgcgcagaagccgcgcgtcgaactc
aagggcctgccgatcggcaaccccaacgacgaatggatggacgcccagcaactggcggca
caggccggcacctatggctccgacctgcctcacggcgaggagcgcttgcagaccttggtg
gatcaggcgccgggcaacatcggcctgcgcctggcccaggccgatctgtacctggcccga
aactggccgcgccgcgctgaaaaccagctcaaggaaaccgagagcatcgcgccgcgcgac
acgggtttggaagtcgcgcaggctcgcaccgcgatggacttgcaggaatggcggcaaatg
gatgcgctgaccgatgacgtggtggcgcgcttcctcgacaaccgtcaggtccagcgtctg
gcccgcgagcgtgaagtgcacgacatgtccgagctgcgtgtcgaagcctatggcggcaag
gctaacggaggcagcggtggcgatgccggcgcggtctccggtagccgggatttcggcatc
cagaccaccctttacagcccgccgatcgatgaggactggcgagtgttcgccggggccgga
tacgccaccggcgattttgccgaaggcaccggccaccaccgcttccagcgtgtcggcctg
gagcgtcgcacccgcgacatgaccctcgaagccgaagtgtcgaatcattcctacggtttc
ggcgacaaacagggcgcgcgtctggcgattgcccgcgatatcaacgaccactggcaatac
ggcggcagccttgaatacctctcggccgaaactccgctgcgggcattgaacagcgacatc
aaggccaacggcggcagcggtttcatccgttggcgcgccaacgagagccgcgagtggcgg
ctggcggtcagcccgtcgcacttcagcgacggcaacaaccgcgtcgaagccttgctgacc
ggaaaagagggcgtctacagcgcgccgaacctgcaagtcgacgcgggcctggaagtgggc
accagccacaactccaagtccgatgacgtgccgtacttcaacccgaagtcggacttcagt
gtcatgccgctgctcaacgtcaatcacgtgctgtaccaccgctacgaaaccgcctggagc
cagcagttccaggccggtgcggggacttacagccagcgtgatcacggcaccggcggcatg
gcattgctcggttacggccagcgctacgcctggaacgacgtgttcgaggtgggcggtttg
ttcagcgtgatcaaccggccctacgacggtgaccgggaaaccgatctgcgtctgctcgtc
gacctcactttccgcttctag
DBGET
integrated database retrieval system
