Pseudomonas fluorescens Pf0-1: Pfl01_0781
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Entry
Pfl01_0781 CDS
T00283
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfo03016
]
Pfl01_0781 (truB)
Enzymes [BR:
pfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pfl01_0781 (truB)
Transfer RNA biogenesis [BR:
pfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pfl01_0781 (truB)
Prokaryotic type
Pfl01_0781 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ABA72524
UniProt:
Q3KI82
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All DBs
Position
916819..917736
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGQADIEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLQFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ctggggttcacctccaacgcagccttgcagaaggttcgctggttgctcaacgccgaaaag
gccggtcacaccggcagtctcgaccctctggccaccggcgtgctgccgttgtgctttggc
gaggcgaccaagttctcgcagtacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggcagacgccgaaggtgaggttttgcaggaacgtccg
gtgaccgttggtcaggccgacattgaagcggttctgccgaaatttcgtgggcaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatggccagcccctgtacaagttggcc
cgtgctggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccttcgaaggcgatactgcgcgtcttgcggtggattgcagcaagggcacctatatt
cgcaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgctgaactg
cgtcgtacccaggccgggcctttcaccctggcgcagaccgtgaccctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggcctgcaggattggccgttgctgcagttctcggaagcgagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgctccgaagttcggcatggtgcgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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