Pseudomonas fluorescens Pf0-1: Pfl01_0994
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Entry
Pfl01_0994 CDS
T00283
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfo03019
]
Pfl01_0994
03009 Ribosome biogenesis [BR:
pfo03009
]
Pfl01_0994
03036 Chromosome and associated proteins [BR:
pfo03036
]
Pfl01_0994
Enzymes [BR:
pfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Pfl01_0994
Messenger RNA biogenesis [BR:
pfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pfl01_0994
Ribosome biogenesis [BR:
pfo03009
]
Eukaryotic type
90S particles
RNase
Pfl01_0994
Prokaryotic type
rRNA processing factors
Pfl01_0994
Chromosome and associated proteins [BR:
pfo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Pfl01_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ABA72737
UniProt:
Q3KHL9
LinkDB
All DBs
Position
1156288..1156977
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctctaagccgtctcgagcgtcagctcggttacaccttcaaggaccaggaa
ctgatggtcctggcccttacgcaccgcagctttgccggacgcaacaacgagcgtctggaa
ttcctcggcgatgcgatcctcaactttgtggccggcgaagccctgttcgaccgtttcccg
ctggctcgtgaaggccagttgtcgcgtttgcgcgcgcgcttggtaaaaggtgagacgctg
gcggtgctggcccgcggtttcgatctgggtgattacctgcgtctgggttccggcgagttg
aagagcggcggtttccgtcgcgaatcgattctggctgacgcccttgaagcactgatcggt
gcgatctacctcgacgccggcatggaagtcgcccgcgaacgcgtactggcctggctggcc
ggcgagttcgaaggcctgacgctggtcgataccaacaaggatccgaagacgcgcctgcag
gaattcctgcaatcgcgcggctgcgaactgccgcgctacgaagtggtggacatccagggc
gagccgcactgccgtaccttcttcgtcgagtgcgaagttgtcctattgaatgaaaaaagc
cggggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga
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