Pseudomonas fluorescens Pf0-1: Pfl01_0998
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Entry
Pfl01_0998 CDS
T00283
Name
(GenBank) putative transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Pfl01_0998
Enzymes [BR:
pfo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pfl01_0998
Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pfl01_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
NMT1
Motif
Other DBs
NCBI-ProteinID:
ABA72741
UniProt:
Q3KHL5
LinkDB
All DBs
Position
complement(1159565..1161025)
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AA seq
486 aa
AA seq
DB search
MFSPTALRPRYAKWLIATGLFLMLSGCVDKPNTLERVKEDGVLRVVTRNSPATYFQDRSG
ETGFEYELVKRFADDLGVELKIETADNLDDLFNQVGKPNGPVLAAAGLVSSEQRKKQVRF
SRSYLEVTPQIIYRNGQSRPTDAGDLVGKKIMVLKGSTHAEQLAELKQKYPGIQYEESDA
VEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFTNIRVAFDLGDARSQSWAVAAGEDNSLL
NEINSYLDKVQKNGTLQRLKDRYYGHVDVLGYMGATTFAQHLQQRLPKYEQHFKAYAKKE
KVDWRLLAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMGVSNRLDPKQSIMGGAKYL
AYMKDQLDESIQEPDRTWFALAAYNVGSGHLDDARKLAAKEGLNPDKWLDVKKILPRLSQ
KQWYSKTRYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGDQVAEGNLHVPGIDKSKPA
QEPAPL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttttccccaacggctttgcgtccgcgatacgccaaatggctgatcgctaccggactc
ttcctgatgctcagtggctgtgttgataaacccaacacactcgagcgcgtaaaggaggat
ggcgtgctgcgggtggtcacccgaaacagccccgccacctactttcaggatcgcagcggt
gaaaccggcttcgaatacgagctggtgaagcgcttcgccgacgatttgggggtcgagctc
aagattgaaaccgccgacaacctcgacgacctgttcaaccaggtcggcaagccgaacggc
ccggtactggcggctgccggtctggtcagcagcgaacagcgcaagaagcaggtgcgtttc
tcccgctcctacctcgaagtcaccccgcagatcatctatcgcaacggtcagtcacgccct
accgatgcgggcgatctggtgggcaagaagatcatggtgctcaagggcagcacccacgcc
gaacaactggcggagctgaaacagaaataccctggcatccagtacgaagagtccgacgcc
gttgaagtggtcgacctgctgcgcatggtcgatgaaggccagatcgacctgaccctggtc
gattccaacgaagtggcgatgaaccaggtgtacttcaccaacatccgcgtggcctttgac
ctcggcgacgcgcgcagccagagctgggccgtggccgccggcgaagacaacagcctgctc
aacgagatcaacagttatctggacaaggtgcagaagaacggcaccctgcaacgcctgaaa
gaccgttattacggccatgtcgacgtcctcggctacatgggcgccaccaccttcgcccag
catttgcagcagcggttgcccaagtacgaacagcatttcaaggcctacgccaagaaagag
aaagtcgactggcgcctgctggcggcgatcggttatcaggaatcgctgtggcaaccggcg
gtcacgtcgaagaccggcgtgcgcgggctgatgatgctgacccagaacaccgcccaggcc
atgggcgtgtccaaccgcctcgatccgaagcaaagcatcatgggcggtgccaagtacctg
gcctacatgaaggatcagctcgacgagtcgatccaggagccggatcgcacatggtttgcc
ctggcggcctacaacgtcggcagcggtcatctggatgacgcacgcaaactggctgccaag
gaagggttgaacccggacaagtggctggatgtgaaaaagatcctgccgcgcctgtcgcag
aagcagtggtacagcaagacccgctacggctacgcccggggcggcgaaccggtgcatttc
gtggcgaacatccgtcgctactacgacatcctcacctgggtgacccagccgcagcttgaa
ggcgatcaggtggccgagggcaacctgcatgtgccggggatcgacaagtcgaaacccgct
caagagcccgccccgctttaa
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