Pseudomonas fluorescens Pf0-1: Pfl01_1128
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Entry
Pfl01_1128 CDS
T00283
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfo03016
]
Pfl01_1128
Enzymes [BR:
pfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pfl01_1128
Transfer RNA biogenesis [BR:
pfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pfl01_1128
Prokaryotic type
Pfl01_1128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AEP-TOTE
Motif
Other DBs
NCBI-ProteinID:
ABA72871
UniProt:
Q3KH85
LinkDB
All DBs
Position
1304746..1305804
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGDALGTAVLKAIAEDFQVDEVLDIPFSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFNGDKAAIDERLQLIAKQGIPNYFGAQRFGHDGGNVVDARSW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAAGVVHDLEQGIAAREADLRDWLINAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgctcggcccgcgggcctatggcgacgccctcggcaccgcggta
ctgaaagccatcgctgaagatttccaggtcgatgaagtcctcgatattccgttcagcggt
gacggcgagcacctgtggatctgggtggaaaagcgcggcctgaataccgaagaggctgca
cgccgtatcgccaaggcggccggtgtaccgttgcgtacggtgagctatgccggtctgaaa
gaccgtcaggcgctgacccgtcagtggttcagcgtgcaattgccgggcaaggctgatccg
gatctgtcggcggcggaaaacgacacgctgaaaatcctcaagaccactcgccacaagcgc
aagctgcaacgcggtgcgcattcggcaaacggtttcaccctgcgcctgacccagttcaat
ggcgacaaggcggccatcgacgagcgcctgcaactgatcgccaaacaaggtattccgaat
tacttcggcgcccagcgtttcggccatgatggcggtaacgtcgtcgatgcccgttcgtgg
gccgcgcgcaaggcactgccggagcagcgcaatgtgcgctcgcgcctgctgtcgaccgcg
cgcagttttctgttcaatcaggtgctcgcggcgcgggtggccgatggcacctggcagcgc
gcccaggtcggcgatctgctggccttcaccgacagccgcagcttttttccggctggtgaa
gccgagtgcagcgatccgcgtctggccattcttgacctgcacccgaccggtccgcagtgg
ggcgaaggtgactcgccggcggccggggttgtccatgatctggagcaggggattgccgca
cgcgaggcggatctgcgcgattggttgattaatgccggtatgagccacgaacgtcgcatc
ctgcggctgcccattggcgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctcccggccggatgcttcgccaccgtattggtgcgcgagctcgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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