Pseudomonas fluorescens Pf0-1: Pfl01_1134
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Entry
Pfl01_1134 CDS
T00283
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pfl01_1134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_1134
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Pfl01_1134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ABA72877
UniProt:
Q3KH79
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Position
complement(1310403..1312985)
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AA seq
860 aa
AA seq
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MNKAVSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFTVLEIKGWENLLAELERVNPVELL
IPDDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCETLTLAIGAAGC
LLAYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ
TAMGSRLLTRWLNRPLRDLTVLLARQTSITCLLDRYRFENLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALGALPELQVAMTDLEAPHLQRLATTTSTYPELAALLEKAIIDNPPA
VIRDGGVLKTGYDSELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIEL
PSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYEALLEDLIS
QLPPLQDTAGALAELDVLSNLAERALNLDLNCPTFVSEPCMRISQGRHPVVEQVLTTPFV
ANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAQ
LRAYTLFATHYFELTVLPEAEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPSEVIVRAREHLSRLEDTALPHEAPKPAAKGKPAAPQQSDMFASLPHPVLDELAKLD
LDDVTPRRALEMLYALKNRI
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagccgtctccgacctgtcctcccacaccccgatgatgcagcagtactggcgc
ctgaagaatcagcacccggaccagctgatgttctaccgcatgggcgacttctacgagatc
ttctacgaagacgcgaagaaggcggctaagttgctggacatcaccctgaccgcgcgcggg
cagtcggcgggtcaggcgattccgatgtgcgggattccgtatcacgcggcggaaggttat
ctggcgaagctggtcaagctcggcgagtcggtggtgatctgcgagcaggtcggcgacccg
gccaccagcaaaggcccggtggaacgtcaggtggtgcggatcatcacccccggtacggtc
agcgacgaagcgttgctggatgagcgccgcgacaacctgatcgcggcggtgctgggcgac
gagcgcctgttcggtctggcggtgctggacatcaccagcggcaacttcaccgtgctggag
atcaagggctgggaaaacctgttggcggagctggagcgggtcaacccggtcgagttgctg
atcccggatgactggccgaaggatctgccggcggaaaaacgccgtggcgtacgtcgtcgt
gcaccgtgggatttcgaacgtgattcggcgctgaaaagtctctgccagcaattctccacc
caagacctcaaaggttttggctgcgaaaccctgaccctggccatcggcgccgccggttgc
ttgctggcgtacgccaaggaaacccagcgcaccgccctgccccatttgcgcagcctgcgc
catgaacggctggacgacaccgtggtgctggacggcgccagccgccgtaacctcgaactt
gacactaacctggccggtggccgcgacaacaccctgcaatcggtggtcgaccgttgccag
accgcgatgggcagccgcttgctgacccgatggctcaaccgtccgctgcgcgatctgacc
gtgctgctggctcgccagacctcgatcacttgcctgctcgaccgctatcgctttgaaaac
ctgcaaccgcagctcaaggaaatcggcgacatcgagcgtatcctggcgcggatcggcctg
cgcaatgcccgccctcgcgacctcgctcgcctgcgcgacgcgctcggtgcgctgcctgaa
ctgcaagtggcgatgaccgatctcgaggcgccgcacctgcaacgtctggcgaccaccacc
agcacttatccggaactggcggcgctgctggaaaaagccatcatcgacaacccgccggcg
gtgatccgtgacggcggcgtgctgaaaaccggttacgacagcgagctcgacgagctgcaa
tcgctgagcgagaacgccggccagttcctgatcgatctggaagcccgggaaaaggcccgt
accggcctcgccaacctgaaagtcggctacaaccgcattcacggctacttcatcgagttg
ccgagcaagcaggctgaatcagcgccggcagactacatccgtcgtcagaccctcaagggt
gccgagcgcttcatcaccccggaactgaaagagttcgaagacaaggcgttgtcggccaag
agccgcgccctggctcgcgagaaaatgctttatgaagcgctgctggaagatttgatcagc
cagctgccgccgctgcaggacaccgcaggtgccctggccgagctggacgtgctgagcaac
ctcgccgaacgtgcgctgaatctcgacctgaattgcccgacgttcgtcagcgaaccgtgc
atgcgcatctcccagggccgtcatccggtggtcgagcaagtgctgacaacgccgttcgtg
gccaacgacctgagcctggacgacaacacccgcatgctggtgatcaccggtccgaacatg
ggcggtaaatccacctatatgcgccagactgcactgatcgtgctgctggcacacatcggc
agcttcgtgccggcagccagttgtgaactgtcgctggtggaccggatcttcacccggatc
ggttccagcgacgacctcgccggcggacgctcgaccttcatggtggaaatgagcgaaacc
gcgaacatcctgcacaatgccaccgagcgcagtctggtgctgatggacgaagtcgggcgc
ggcaccagcacctttgatggtctgtccctggcgtgggcggcggcggagcgtttggcgcag
ctgcgggcctatactctgtttgcgacgcactatttcgaattgaccgtgttgccggaagcc
gaaccgctggtggccaacgtgcacctcaacgccaccgagcacaatgagcgcatcgtattc
ctgcaccatgtgttgccggggccggcaagccagagttatggccttgcggttgcgcagctg
gccggtgtgccaagcgaagtgatcgtgcgtgctcgtgaacacttgagccgcctggaagat
accgcgctgccacatgaggcgccgaagccggccgccaagggcaaaccggcagcgccgcaa
cagagcgacatgtttgccagccttccgcatccggtgctggatgagttggccaaactggat
ctggatgacgttacaccgcgtcgtgcgctcgaaatgttatatgcacttaagaaccggatc
taa
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