Pseudomonas fluorescens Pf0-1: Pfl01_1255
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Entry
Pfl01_1255 CDS
T00283
Symbol
hepA
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfo03021
]
Pfl01_1255 (hepA)
Transcription machinery [BR:
pfo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pfl01_1255 (hepA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABA72998
UniProt:
Q3KGV8
LinkDB
All DBs
Position
complement(1428182..1431028)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQQVDDVDGLMVYHGLNAQNEAVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSALWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDKVSPEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDK
GRLSPAAHKTIHGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGEHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGEWQALIDEARTERERLE
AELHTGRDRLLELNSGGAGEGEALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSSRVAF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEDKVTPRHAERVAEARRRLAADTDEEL
ARLTALQAVNPTVRDSELDALRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagcagagcttggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctttacccggccactggc
gagactcgccagtacgcgctacggaatgcgcccctcacccgcgtgcggttttcgcccggc
gattcgatcacgcacttcgaaggctggaagatgaccgtccagcaagtcgacgacgtcgac
ggcctgatggtctaccacggcctcaacgcgcagaacgaagcggtcaccctgccggaaacc
caactgtcgaacttcattcagttccgtctggccagcgaccgtctgttcgccggccagatc
gacccgctggcgtggttctccctgcgttatcacaccctggaacacaccagccgccagttg
cagtccgcgctctggggcctgggtggcgtacgcgcccaaccgatcgcccaccagttgcac
attgcccgtgaagtcgccgaccgcatcgcgccgcgcgtattgctggcggacgaagtgggt
ctgggcaagaccatcgaagccggtctggtgatccatcgtcagttgctgtcgggccgcgcc
aaccgcgtactgatcctggtgccggaaaacctccagcaccaatggctggtggaaatgcgc
cgccgcttcaacctgcaggtcgcgctgttcgacgaagaacgtttcatcgaaagcgatgcc
accaacccgttcgaagacacccagctggccctggtggcgctggagtggctggtcgacgac
gaaaaggcgcaagacgcgttgttcgctgccggttgggacctgatggtggtcgacgaagcc
caccacctggtgtggcacgaagacaaagtcagcccggaatactcgctggtcgaacagctg
gccgaggtcattcccggcgtgctgctgctcaccgccaccccggaacaactcggtcaggac
agccacttcgcccgtctgcgcctgctcgacccgaaccgtttccatgacctggccgccttc
cgtgccgagagcgaaaactatcgcccggtggccgaagccgttcaggagctgctggacaag
ggtcgcctgtcgccggccgcgcacaagaccatccacggtttcctcggcaacgaaggtgaa
gccctgctcaccgccgtcaacgatggcgacaccgaagccagcgcccgcctcgtgcgtgaa
ctgctcgaccgccacggcaccggccgcgtgctgttccgtaacacccgcgccgccgtgcag
ggtttcccggagcgcaaactgcacccgtacccgctgccgtgcccggacgaatacctcgaa
ctgccgctgggcgagcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagaacgctggtggaaattcgacccgcgcgtcgagtggctgatcgaccag
ttgaaaatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccctgcgcgtgcgctccgggatcccggccacggtgttccacgaaggc
atgaacatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagagttcggcgcg
caggtgttgatctgctcggaaatcggcagtgaaggtcgcaacttccagttcgcccaccac
ttggtgctgttcgacctgccgtcgcacccggacctgctggagcagcggatcggtcgtctc
gaccggatcggccagaagcacatcatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagccctgaacgcgttcctcaacacctgcccg
accggcaacgccttgcagcatcagttcggcccgcgcctgctgccgttgctcgaagaggcc
gacgacggcgaatggcaagcgctgatcgacgaggcgcgcaccgagcgcgagcgtctggaa
gccgagctgcacaccggtcgcgaccgcctgctggaactcaactccggcggcgccggcgaa
ggtgaggcgctggtcgaggccatcctcgagcaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgagaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtaaccaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggatctggtgctgtccggttcgatgggcaac
accgccgtcgcgctgatcaagaacaaggcgctcaagccgggcaccgtgctgctggaactg
ctctacgtcagcgaagtggttgccccgcgttcgctgcaactgggccgttacctgccgccg
gccgccctgcgctgcctgctcgatgccaacggcaacgacctgtcgtcgcgcgtggcgttc
gaaaccctcaacgatcaactggaaagcgtgccgcgcgccagcgccaacaagttcatccag
gcccagcgcgatcagctgacgccacggatcaacgccggtgaagacaaggtcaccccgcgc
cacgccgagcgcgtggccgaggcccgccgccgtctggcagccgacaccgacgaagaactg
gcacgcctgaccgcgttgcaggcggtcaacccgaccgtgcgcgacagcgaactggacgct
ctgcgcaagcagcgtgaacaaggtctggcaatgctcgacaaggcagcgctgcgactggaa
gcgatccgggtgctggtggcgggttaa
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