Pseudomonas fluorescens Pf0-1: Pfl01_1437
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Entry
Pfl01_1437 CDS
T00283
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfo03009
]
Pfl01_1437
Enzymes [BR:
pfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Pfl01_1437
Ribosome biogenesis [BR:
pfo03009
]
Prokaryotic type
rRNA helicases
Pfl01_1437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABA73180
UniProt:
Q3KGC6
LinkDB
All DBs
Position
1612101..1613441
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AA seq
446 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSANR
PKPDALVSSDGMAPLKRRKPAAPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccaacgcctgtgcaagccgcggccattccgctggcgcttcaggggcgtgacctg
cgggtgacggcgcaaaccggtagcggcaagaccgccgctttcgtcctgccgatcctcaac
cgcctgatcggcccggccaaggttcgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccaacagaccctgaaggaagtcgagcgcttttcgcagttcactttcatc
aagtccggcctgatcaccggcggtgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggacatcctgatcggcaccccgggccggatgatcgagcaactgaacgccggcaac
ctcgacctgaaagaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggtttcgccgaagacgtgcagcgtctggtcgacgaatgcccgaaccgtcagcagaccatg
ctgttctccgccaccactggtggttccggactgcgcgagatgatcgccaaggtgctgaac
aaccctgagcacctgcagctcaacgcggtcagccagctgaacgacaccacccgtcagcag
atcatcaccgccgaccacaaccagcataaagaacagatcgtcaactggctgctggccaac
gagacctatcagaaggccatcgtcttcaccaacacccgggccatggccgaccgcatctac
ggtcgtctcgtcgcccaggaatacaaggcgttcgtgctgcacggagaaaaagaccagaag
gatcgcaaactggcgatcgaccgtctgaagcagggcggcgtgaagatcctggtggctacc
gacgtggcggcccgtggtctggacgtcgacggtctggatctggtgatcaacttcgacatg
ccacgcagcggcgacgaatacgtgcaccgtatcggtcgtaccggccgagccggcaacgac
ggtctggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgt
tatctgaagcagagcttcgagcgccgcaccatcaaggaagtcaaaggcacctacggcgga
ccgaaaaaggtcaaggcctcgggcaaagccgtcggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaagaaaactgccgccaaaaccccgaccaagcgcaagagcgccaaccgt
ccgaaaccggacgctctggtgagcagcgacggcatggccccactgaaacgccgcaaaccg
gcagcgccagcggctgagtaa
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