Pseudomonas fluorescens Pf0-1: Pfl01_1944
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Entry
Pfl01_1944 CDS
T00283
Symbol
rtcR
Name
(GenBank) sigma54-dependent transcriptional regulatory protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfo03000
]
Pfl01_1944 (rtcR)
Transcription factors [BR:
pfo03000
]
Prokaryotic type
Other transcription factors
Others
Pfl01_1944 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
MCM
AAA_30
AAA_7
AAA_2
bpMoxR
BrxC_BrxD
AAA_19
IstB_IS21
ATPase_2
TniB
ABC_tran
AAA_14
AAA_33
T2SSE
ResIII
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ABA73687
UniProt:
Q3KEW9
LinkDB
All DBs
Position
complement(2217490..2219091)
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AA seq
533 aa
AA seq
DB search
MSSKRTVAIGFIGATLDRVGKGANRWNHWRPSVGLCQQPDVLIHRLELIHGTDARDASLA
ERIREDIRQVSPDTEVRLHPMALRNPWDFEEVYGALHDFTSEYTFDTEREDYLVHITTGT
HVAQICWFLLTEARYLPARLIQTSPARRKSEEEPATGTHALIDLDLSRYDRIASRFTHKR
LEGLEFLKSGIATRNTAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRSR
HQMQGRFVEVNCATLRGDCAMSALFGHVKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
ADEQAMLLKAIEEKRFFPLGSDKEVDSDFLIIAGTHRDLRSRVAEGLFREDLYARINLWT
FDLPGLAGRREDIEPNIDFELERHAREYGQLVRFNLEARRRYLSFASSREAAWLGNFREL
SASITRMATLADSGRIDAAQVEEEIDRLRYAWGLAQPAGATSDLPGDAETLDLFDRLQLK
AVLEVCRQADSLSDAGRRLFGVSRQAKAQPNDADRLRKYLGRFGIEWSQLRER
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagcgcactgtcgccatcggtttcatcggagccaccctcgatcgcgtcggc
aaaggcgccaaccgctggaaccattggcggcctagcgtcggcctgtgccagcaaccggac
gtcttgatccatcgactggaactgatacacggcacggacgcccgggacgcgagcctggcc
gaacgcattcgcgaggacatccgtcaggtgtcgccggatacagaggtgcgcctgcacccg
atggcgttgcgcaacccctgggatttcgaagaggtctacggcgcactccacgacttcacc
tccgaatacaccttcgataccgagcgtgaggactatctggtgcacatcaccacggggacc
cacgtcgcgcagatctgctggttcttgctgaccgaggcgcgctacctgccggcacgcctg
atccagacctcccccgcccgtcgcaagagcgaagaagaaccggccaccggcacccacgcc
ctgatcgaccttgatctgtcgcgctacgaccggattgcctcacgcttcacccacaaacgt
ctggaaggcctggagtttctcaagtccggcatcgccactcgcaacaccgcgttcaaccgt
tccatcgagcagatcgaacgcgtggccgtgcgctccaaagcgccgatgctgctgatcggc
ccgaccggcgccggcaagtcctttcttgcccgacgcatctatgagctcaaacgcagtcgc
catcaaatgcaggggcgtttcgttgaagtcaactgcgcgaccctgcgtggcgactgcgca
atgtccgcgctgttcggccacgtcaaaggcgcctttaccggcgcacaaaacgctcgcgac
ggcctgctgcgagcggctgacggcggcatgttgtttctcgacgagatcggcgaactgggg
gcagatgaacaagcgatgctgctcaaggccatcgaagagaagcgcttcttcccgctgggc
tcggacaaggaagtcgacagcgacttcctgatcatcgccggcacccaccgcgacctgcgc
agtcgcgtcgccgaaggtctgttccgggaagatctctacgcacggatcaacctctggacg
ttcgacctgccaggcttggcaggacgccgcgaagacatcgaacccaatatcgatttcgag
cttgaacgtcacgcacgcgaatacggccaactggtgcgtttcaatcttgaagcccgacgg
cgctacctgagtttcgccagctcacgggaagctgcgtggctgggcaatttccgtgaactc
tcggcctcgatcacgcgcatggcgacgctggccgacagcgggcgaatcgatgcagcgcaa
gtggaagaggaaattgatcggctgaggtatgcgtggggcctggcgcaaccggccggtgcg
acaagtgacctgccgggcgatgccgagacgctggacctgttcgatcgattgcaattgaag
gcggttctggaggtttgcagacaggcagacagcttgtcggatgccggcagacgactgttc
ggcgtgtcgcgacaggcgaaagcacagcccaacgatgcggaccgattgaggaagtacctc
ggacggttcggcattgaatggagccagttgcgagagcggtga
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