Pseudomonas fluorescens Pf0-1: Pfl01_2042
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Entry
Pfl01_2042 CDS
T00283
Name
(GenBank) putative Rhs protein
Organism
pfo
Pseudomonas fluorescens Pf0-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
DUF4595
DUF2963
OCRE
Motif
Other DBs
NCBI-ProteinID:
ABA73785
UniProt:
Q3KEM1
LinkDB
All DBs
Position
complement(2323362..2328092)
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AA seq
1576 aa
AA seq
DB search
MSILMGEIVANLNAKQPDAQAIISDFKKCLKDYREHAEAWYGGILDAEQQFKVGDEVGTA
DKDSKKENTLYANCPANGKLVLVHSFESARFVPIGNTPVRLTPVVDGRFVGKNEVGPAIN
KTIDATGILEVSGLTPNQQYKITFFPNPTPAQIDSLFNSYQGVIGELGGWLQTEWSTSFL
PLWQAHTDASLGGRALQELEAAWEGFLKAIMGLWGDIKSLYDLVAHPRENYEKLKNFFTE
EQIKKIYDASAEAIHTALLIASDEPLMWIYVAAIVAWVKMLPPQTCTEVLAQMSTEFLLN
ILVGVVLTGGLGLAVRVGTKAIKGVQASGKVVKLIEDFTGMLMKVSKSKATPHTEASRPL
LLNGDAAFNPARKADVQIASHKPAETAKAPEQKHPVSSGKVESDAQVQARRKNEPVSRAE
QVEKVDNAPDQSKNPADKPALCVDDTCSDGEPVSMVTGEELLSITDGALAGLLPFKWTRL
YRSSAVEVDSRLGHGWSHSLSHRLQLDDEGVLWTDDENRQTRFPMPSEQRPSITNSLAQA
AIFLGDAPGELILTQAGAKASFYHFRAGRLTTISDAYDNRVHISYDLVDRIQRIDNGAGR
SLFVRYDGRHIASIDQQQQRAEYDERGERQDPWLTIQTLVTYRYNAHNQLIASTNAVGET
EYYRYNDQHVILERQLAGGASFFWEWEREGKHSRCIHHWANYAQMEARYEWDDKGSVTVY
NADGSELVYVHDENARLVSETAPDGGETQNTYDDQGRLVAVKDPMGAITEYQYSEAGRLM
AVIPPEGQPTRYNYFNGQLIDVQRGKARWQYDRNRQGDITRQIDPQGNETHYSYDRQGRL
LEIRYPDGSRHQLGWNNLGQLLEERLPDGGQRKYRYDALGRQITRQDEFGAISQYQWDAV
DRLTQVTLPGGATRAFTYNPYGRVTAERDELGRITRYEYADNLHLVSRRINPDGSQLRYR
YDNSGLLLTEIENEHGEHYKLDYYSNGLIQQETGFDGRRTAYEYDLNGQLLKKTEFGDDG
SELVTEYQRDAAGRLLVKTLADGEEIHYSYDALGRLVNVDDGHWPLAYEYDVQDRLITEH
QGWGTTRYEYDSVGQLSHCRLPDGSTLDYRHLSGGRLSSIDLNGSRLTSHQFSAGREQQR
QQGLLLSQYQYDEQGRLQAHSVSQREKNLFQRRYNYDANGNLAGIDDSRKGNRSFHYDPL
DRLTSVRGATPETFAHDPAGNLLGQNNEGTANLANVKGNRLLMQGDRHYDYDAYGNLIRE
RRGTGQKLVTEYRYDCQHRLIGASLPGGSTASYKYDAFGRRIEKTVDGHTTEFLWQGERL
IAESGDNRYRTYIYEPGSFRPLAMLDGEGPRKATPFYYQLDHLGTPQELTDYSGEIMWSA
KYRAYGNLAALDIGEIDNPLRFQGQYFDSETGLHYNRHRYYNPSSGRFLTPDPIKLAGGL
NSYQYVPNPTGWIDPLGLACKQANGPTPKKPPQKDTPPEIGETLEFEHFEQARNAALEWL
ESNGFKAEKPTIGKFGTNAGKNVGMQTADGKTGYRIEYDERSGAHINVWSGKKPAPHYLF
NASEKTVLKLLKAFKK
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttgatgggtgagattgttgccaatctcaatgcaaaacagcctgatgctcag
gccatcatcagcgacttcaagaagtgtctgaaagattatcgcgagcatgccgaagcctgg
tacggcggtattctggacgcagagcagcagttcaaggtcggtgacgaagtcggcacggcg
gacaaggacagcaaaaaggaaaataccctttatgccaactgccctgccaacggcaagctc
gtgctcgtacacagtttcgaatccgctcgctttgtgccgatcggcaatacgccggtacgt
ctgacgcctgtggtcgatggtcgcttcgttggcaaaaacgaagtggggccggcgatcaac
aagaccatcgatgcgaccggcatcctcgaagtctcgggccttacaccgaaccaacaatac
aagatcaccttcttccccaaccctacgcctgcccagatcgatagtctgttcaactcctat
cagggggtaatcggcgaacttggaggctggttacagacggagtggagcaccagtttccta
ccgctctggcaagcgcacaccgatgcctcgctgggcgggcgcgccctgcaagaactggaa
gccgcatgggaaggttttctgaaagcgatcatgggtttgtggggcgatatcaaaagcctc
tatgacctggttgcgcaccctcgtgagaactacgagaaactgaaaaacttcttcaccgaa
gaacagatcaagaagatttatgacgcctccgcagaggccattcacactgccctgctgatt
gccagcgacgaaccactgatgtggatctacgtcgcagcaatcgtggcctgggtgaaaatg
ctgccgccgcaaacctgcaccgaagttctggctcagatgagcacggagttcctgctgaac
attctggtcggcgtcgtcctgactggcggtctcggtctggcggtacgtgtcggcacgaaa
gccatcaaaggcgtacaagccagcggtaaagtcgtgaagctgattgaagacttcacgggc
atgctgatgaaagtcagcaaatccaaggcaacaccgcataccgaggcgtcgaggcctttg
ctgcttaatggtgatgcggcgtttaacccggcgcgcaaggccgatgttcagattgccagc
cacaaacctgctgaaaccgctaaggcacctgaacagaaacatcctgtcagcagcggaaaa
gttgaatccgatgcgcaggttcaagcccggagaaaaaatgaacctgtctctcgagcagag
caagtagaaaaggtcgacaacgctcctgatcagtcaaaaaacccggcggacaaacctgcc
ctgtgtgtcgacgacacctgctccgacggtgaaccggtttctatggtgactggcgaggag
ttgttaagtattacagatggcgcactggccggtttgcttcctttcaaatggacgcgcctg
taccgcagcagtgccgtggaagtcgatagccgtctgggccatggctggagccattctcta
tcccatcgcttgcaactcgacgatgaaggtgtgctgtggacggacgatgaaaaccgtcaa
acccgcttcccgatgccgagtgaacaacgcccctctatcaccaatagtctggcgcaagct
gcgattttcctcggtgacgctcccggggaactgatcctcacgcaggctggcgcgaaagcc
agtttctatcacttccgtgccgggcgcttgaccaccatcagcgacgcctatgacaaccgg
gtgcacatcagctatgacttggtcgaccgcatccaacgtatcgacaatggcgctggccgt
tcgctgttcgttcgttacgacggtcgacacattgcatcgatagatcaacagcagcagcgt
gcggaatacgacgagcgcggcgaacggcaagatccatggctgaccattcagacactcgtc
acctaccgctacaacgctcacaaccagctcatcgcttcgaccaacgccgtcggtgaaacc
gagtattaccgctacaacgaccaacacgtcattcttgaacggcaactggccggtggcgcc
agtttcttctgggagtgggagcgtgaaggcaagcattcccgttgcattcaccactgggcc
aactatgcccaaatggaagcgcgttacgaatgggacgataaaggctcggtaaccgtctac
aacgctgacggtagcgagcttgtctacgtgcatgacgaaaatgcgcgtttggtcagcgaa
acagcacccgatggcggcgaaacgcaaaatacctatgacgatcaaggtcgtctggtcgct
gtaaaagatccaatgggcgccatcactgagtaccaatacagtgaggccggtcgcttgatg
gcggtgattccaccggaaggtcagcctacccgttacaactacttcaacggccagctcata
gacgtccagcgcggcaaggctcgctggcagtacgatcgcaaccgtcagggcgacatcacc
cgacaaatcgacccgcagggcaacgaaacacattacagctacgatcgtcagggccgacta
ctcgaaattcgttaccctgatggcagccgtcatcagttgggctggaacaatctaggtcag
ttactggaagagcgccttccggacggtggccagcgcaagtatcgctatgacgctctcgga
cgccagatcacccgccaggacgaattcggcgccatcagccaataccaatgggacgcagtc
gatcgcctgacccaggtcaccctgcccggcggcgccacccgagctttcacctacaaccca
tacggacgcgtcactgccgaacgcgatgagctcggccgcatcacccgctacgaatacgcc
gacaacctgcatctggtcagccgccgcatcaaccccgacggcagccagttgcgctatcgc
tacgacaattcaggtctgctgctcactgaaatcgaaaacgaacacggcgagcattacaaa
ctcgactactactcgaacggcctgatccagcaggaaaccggtttcgatggccgccgcacc
gcgtacgaatacgacctcaacggtcaattgctgaagaaaaccgaattcggcgatgacggc
agcgaactggttaccgagtaccagcgcgatgctgccggtcgactgctggtgaaaaccctc
gccgatggcgaagaaatacactacagctacgatgccctgggccgtttggtgaatgtcgac
gacggacactggccgcttgcctacgaatacgacgtgcaggatcgcctgatcaccgaacac
cagggttggggcaccacacgttacgaatacgacagcgtcgggcaactgagtcactgccgc
ctccccgacggcagcacactcgactaccgccatttgtcaggcggacgtctgagcagcatc
gacctcaacggctcacgcctgaccagccaccaattcagcgccggtcgcgaacagcagcgc
cagcaaggcctgttgctcagccaataccagtacgacgaacaaggtcgcctgcaagcgcac
agcgtcagccagcgtgaaaaaaacctgttccagcgtcgctataactacgacgccaacggc
aacctcgccggcatcgacgacagccgaaaaggcaaccgcagcttccactacgacccgctg
gaccgcttgaccagcgtacgtggcgcgacacctgaaaccttcgcccacgatccggccggc
aacctgctcggccagaacaacgaaggcacagccaacctcgccaacgtcaaaggcaaccgt
ctgctgatgcaaggcgaccgccactacgactacgacgcctatggcaacctgatccgcgaa
cgccgtggcaccggacagaaactcgtcaccgaatatcgctacgattgccagcaccgcttg
attggcgccagcctaccgggtggcagcactgcatcctataagtacgacgccttcggtcgc
cgcatcgagaaaactgtcgatggccataccaccgaattcttgtggcaaggcgaacgcctg
atcgctgaaagcggtgacaaccgctatcgcacctacatctacgaacccggcagcttccgc
ccgctggcgatgctcgacggcgaaggcccgcgcaaggcgacgccgttctattaccaactc
gatcacctcggcacaccgcaggaactcactgactacagtggcgagatcatgtggtcggcg
aagtaccgcgcctacggtaatctcgccgccttggacatcggcgaaatcgataatccactg
cgcttccagggtcagtatttcgattccgagacggggttacattacaaccggcaccgctac
tacaatccgagcagtgggcgctttttgacgccggatccaatcaagcttgcgggtgggtta
aatagctaccagtacgtgcctaacccaacaggctggatagatccattggggttggcttgt
aaacaagctaacggccccacccccaaaaaacctccgcaaaaagacacacctcctgagata
ggagaaactctagagtttgaacatttcgagcaagcccgcaacgcagcacttgagtggctc
gaaagtaatgggttcaaggccgagaaacctactattggcaagtttggtacaaacgcagga
aagaacgtcggcatgcaaaccgctgatggaaagactggctaccggattgaatacgatgag
agaagtggtgcacacataaacgtttggtcaggaaaaaaaccagcaccccactacctattc
aacgcaagcgaaaaaactgtactaaaattactcaaggcattcaaaaaatga
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integrated database retrieval system
