Pseudomonas fluorescens Pf0-1: Pfl01_2944
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Entry
Pfl01_2944 CDS
T00283
Name
(GenBank) Conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfo03032
]
Pfl01_2944
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_2944
Enzymes [BR:
pfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pfl01_2944
DNA replication proteins [BR:
pfo03032
]
Prokaryotic type
DNA Topoisomerases
Pfl01_2944
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pfl01_2944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABA74685
UniProt:
Q3KC20
LinkDB
All DBs
Position
3385914..3386951
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTALTEVLPSDLHYVDDTQPGISRKKLRGKFAYFNPEGQRITDPDEIKRINSLAVPPA
YIDVWICADPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
ALLASPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHSVSSSDVNAYLQNLTG
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVARQLGNTPAVCRKCYIH
PAVVEHFMLGALAELPKPRIRKGLRKEEVALALFLERMVEQADTP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatactgcgctcaccgaggtattgccttcggatctgcattacgtcgatgacacc
cagcccggtattagccgaaaaaaactgcgcggaaaatttgcctatttcaaccccgaaggc
cagcgcatcaccgatcctgacgagatcaagcgcatcaactcgctggccgttccaccggcc
tacatcgacgtgtggatctgcgccgacccgcgcggtcatctgcaagccaccggccgcgat
gcccgtgggcgcaagcaatatcgctatcacgctcgctggcgcgaggtgcgcgacgcggac
aagtattcgcgtcttcgtgaatttggtctggcgctgcccaaactgcgtaaacagctggag
gcgctgctggcctcaccgggcttcagtcgcgacaaagtcatggcgacggtcatcacgctg
ctcgacgccacgctgatccgcgtcggcaacacgcaatacgcgcgagacaatcgctcctac
ggcctgaccaccctgcgcagccggcatgtcgaggtcaacggcagcgcgatcctgttccag
tttcgcggcaagagcggcatcgaacatcagattacggtgaaggaccggcgtctggcgcga
atcatcaagcgctgccttgagataccggggcagaacctgtttcagtatctggatgaaaac
ggcgagcggcacagcgtcagctcttccgacgtcaacgcctacctgcaaaacctgaccggt
gcggacttcactgccaaggattaccggacctgggccggcagcgccctcgctttggcggtt
ctgcgggagctgcaatgggagtccgaaaccgaggccaagcggcatgtggtcgagatggtg
aaaggcgtcgcccgccaactgggcaacacgccggcggtctgtcgaaagtgctacatccac
ccggcggtggtcgagcatttcatgctcggcgccttggccgagttgccgaaaccgcgcatc
cgcaagggcctgcgcaaggaagaagtcgcactggcgctgtttcttgaacggatggtcgag
caggcagacacgccttga
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