Pseudomonas fluorescens Pf0-1: Pfl01_2976
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Entry
Pfl01_2976 CDS
T00283
Name
(GenBank) putative sigma-54 activated regulatory protein, helix-turn-helix, Fis-type
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfo03000
]
Pfl01_2976
Transcription factors [BR:
pfo03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pfl01_2976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
Mg_chelatase
AAA_2
AAA_3
AAA
HTH_38
HTH_7
HTH_30
AAA_16
TIP49
HTH_50
HTH_23
HTH_28
PAS_8
HTH_22
IclR_C
Motif
Other DBs
NCBI-ProteinID:
ABA74717
UniProt:
Q3KBY8
LinkDB
All DBs
Position
complement(3415294..3417174)
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AA seq
626 aa
AA seq
DB search
MLCNHMRLVIINDKNIQECGKVMSGQQMNIRDMHGLDEVRRRFLDGHSLPADLLPTAVAN
SWERSRKAGLSPWDKRLTGRWRTHELSSSDSRLAACAQPELDRLWGIFGGQDWALFCVNL
EGVIVYAKHASQPDLVDPLKVGKRVNEVDIGTTAPSCTLHEQQPFIVCGGMHYLKEFENF
FCVSVPVFGVRGELVGAIDITGIGQRNATAVLEQLKIASMAIESRLYSGLVDCQIVALQF
DARLIGTPFQGLVAFDQNGRFCAANKVAKKILGIDASSPVESSLDWDSFFERGPQSIVVN
SPSLIALNDGSSVYAQSLSLPGGAQPAARLCHTSPGVGHDPALNQQFNMASKAFAASIPI
ILQGETGTGKEVFARALHDSLNPGAPFIAINCSAIPENLIESELFGYVEGTFTGARRGGA
KGRIEEAHGGTLLLDEIGDMPFNLQTRLLRVLQEREVTRLGSSERHPVNIRVISATHCDI
HKLIEEHRFREDLFYRLNGMQVGIPALRQRQDMEDIITKLTQRYQGGAIHPAALELLKNQ
EWRGNIRQLEQVIRLAVALAGAGLVILPEHFPGLEQPEEKRDEKSLKEFERKKIQDALDA
NRGNVKATAQQLGVARGTIYRKLRME
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctatgtaatcatatgcggctggtcattattaatgataaaaacatacaagaatgtgga
aaggtaatgagtggtcagcaaatgaatataagagacatgcatggccttgatgaggttcgg
cgtcgctttctggatgggcactctttgccggcggatctgctgcctactgcagtagccaat
tcttgggagcggtccaggaaagcagggctctcaccttgggataagcgactgactggacgt
tggcgcacccatgaattaagtagttcggattcgcgtttggctgcatgcgctcaacctgag
ctcgacaggctgtggggaatattcggagggcaagactgggccctgttttgcgtcaacctc
gaaggcgtgatcgtttatgccaagcacgcgtcccagcccgaccttgtggacccactgaaa
gtgggaaagcgcgtcaatgaagtggatatcggaaccactgcgcccagttgcacactccat
gagcagcagccgtttatcgtctgcggcggtatgcattacttaaaagaatttgaaaatttt
ttctgcgtatccgttcctgttttcggtgtgcgtggggagttggtgggtgcaatcgacata
accggtatcggccagcgcaatgcgactgctgttctggagcagctaaagatcgcgtccatg
gccatcgaaagcaggttgtattcggggttggtggattgccagatcgtagcacttcagttt
gacgcgagattgatcggaacacctttccagggattggtcgctttcgatcagaatggaagg
ttctgtgccgccaataaagtagcgaagaagatattgggcatcgatgcttcttcgccagtc
gagtcctcattggactgggatagtttttttgagcgtgggccacagtccatagtcgtgaac
tcacccagtctgatagcgctgaacgacgggtcttcggtttatgcccagtcgttatcgttg
cctggcggcgctcagcctgctgctcgtttgtgtcatacatcccctggggtcggacacgat
cctgcgctcaatcagcaattcaacatggcctcgaaagccttcgcagctagcattcccatc
atcttgcaaggcgaaacgggtacgggaaaagaggtattcgccagggcacttcacgactcg
ttgaatcctggcgctccgttcatagccattaactgttctgccatacctgagaatttgatt
gaatcggagttgtttggctacgttgaaggaacatttacaggggcacgtcgaggcggtgcg
aaaggtcgtatcgaagaagcgcatggcgggacattattgctcgatgagattggcgatatg
ccgttcaaccttcagaccaggctgcttcgggtactgcaagagagggaagtgacccgtctt
ggcagctcagaacgacatccagtcaatattagggttatcagcgcgacccattgcgatatc
cataagcttattgaggagcatcgtttcagagaggatcttttttatcgcctcaatggcatg
caggttggtattccggcgctccgtcagcggcaggatatggaagatatcatcaccaaattg
acccagcgctatcagggaggcgcgattcatcccgccgcgttggagctgctgaagaaccag
gagtggcgcggaaatatcaggcaactggagcaggtgatccggctggctgtggctttggct
ggcgcagggctcgtgatcctgccggaacactttccagggttggagcagcctgaagagaag
cgtgatgagaaatcgttaaaggaatttgaaaggaagaagattcaagacgcgctggatgct
aatcgcggcaacgtgaaagcgactgcgcagcagctcggcgttgcgcgtggcactatctat
cgtaagctgagaatggaatag
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