Pseudomonas fluorescens Pf0-1: Pfl01_3649
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Entry
Pfl01_3649 CDS
T00283
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pfl01_3649 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_3649 (xthA)
Enzymes [BR:
pfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Pfl01_3649 (xthA)
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Pfl01_3649 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABA75387
UniProt:
Q3KA17
LinkDB
All DBs
Position
4129620..4130432
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEEVRALGYHVYFHGQK
GHYGVALLSRQEPIAVHKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP
TKFPAKQRFYSDLQALLESQFHNEQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF
LPEEREWMARLKNWGLTDSFRHLNPDVTDTFSWFDYRSRGFEDEPKRGLRIDVILASHGL
LPRVKAAGVDYELRGMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtttccttcaacatcaacggactgcgggcccgtccgcatcagctggcggcg
ctgatcgagaagcatcagccggacgtgatcggcctgcaggaaaccaaggtccacgacgac
cagttcccgctggaagaagtgcgggccctgggttatcacgtgtatttccacggtcagaaa
ggtcattacggcgttgccctgctctcgcgccaggaaccgattgccgtacacaaaggtttt
gccaccgatgaagaagacgcacagcggcgctttatctggggcacgttcgccgacgccaac
ggcgtgccggtgacgatcatgaacggctatttcccacagggtgaaagccgcgaccatccg
accaaattcccggccaagcagcgcttctacagcgatctgcaagcgctgctggaaagccag
ttccacaacgaacagccgctggtggtgatgggcgacgtcaacatttccccggaagactgc
gacatcggcatcggcccggacaacatgaagcgctggctgaaaaccggcaaatgcagcttc
ctgccggaagagcgcgagtggatggcccgcctgaaaaactggggcctgaccgacagcttc
cgccatctgaacccggacgtgaccgacacgttcagctggttcgactaccgcagccgtggt
tttgaagacgagccgaagcgtggtctgcggattgatgtgattctggcgtctcatggcttg
ctgccgcgtgtgaaagccgccggtgtcgactatgaactgcgcgggatggaaaagccttcg
gaccatgcgccgatctggctggaattgagctga
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