Pseudomonas fluorescens Pf0-1: Pfl01_3903
Help
Entry
Pfl01_3903 CDS
T00283
Symbol
mrdA
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo00550
Peptidoglycan biosynthesis
pfo01100
Metabolic pathways
pfo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pfl01_3903 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pfl01_3903 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Pfl01_3903 (mrdA)
Enzymes [BR:
pfo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pfl01_3903 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pfl01_3903 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ABA75640
UniProt:
Q3K9B4
LinkDB
All DBs
Position
complement(4414407..4416299)
Genome browser
AA seq
630 aa
AA seq
DB search
MPEPIPIKDHEKETRLVNKRLIACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLTITRERATDVNQELDEVINLLHLPAEDRAVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGLDVEPQFVRNYPLGAHFAHSIGYV
GRINEKESKTLDSVEYRGTQSIGKTGIERFYEPQLHGHVGYEEVETNAQGRVLRVLKHTD
PIPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPTKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccatccctatcaaggaccacgaaaaagaaacgcggctggtcaacaaacgc
ctgatcgcctgtgccttgttcgttttcgccatcagttgtgccctggtggtacgcctgtac
atcctgcaagtcgtcgagttcgattaccactcgaccatctctgaaaacaatcgcgtccat
gtcctgccgatcccgccgacacgcggcctgatttacgatcgcaacggcgtgttgctggcc
gataatcgtcccagctacaacctgaccatcacccgcgaacgggcgactgacgtcaatcaa
gagctggatgaagtcatcaacctcctgcacctgcccgccgaagaccgcgcagtctttgac
aaagccatgaagcagtcgcgtcatccgtttacacccgtaacgctgttctatgagctaacc
gaagaacagatcgccgtgctggcagttaacgagttccgtctaccgggcctggatgtcgag
ccacaattcgttcgtaactacccgttgggtgcgcacttcgcacactcgatcggttacgtt
ggccgtatcaacgaaaaagaatccaaaaccctcgactccgtcgaataccgtggcacccaa
tccatcggcaagacgggtatcgaacgcttctacgagccacagctgcacggccacgtcggt
tacgaggaggtagagaccaacgcacaaggtcgagtactacgggtcctgaaacacaccgat
ccaataccaggcaaaaacattgtcctgagcctcgacgtcaaactccaggaagccgccgaa
gccgcactgggcgaccgtcgcggctcggtcgttgcactggacccctctaccggcgaagtg
ctggccatggtcagcaacccgagcttcgaccccaatctgttcgtgaccggtatcagctcc
aaggaatattccgcgctgcgcgactccatcgaccgtccgctattcaaccgcgtgctgcgc
ggtctgtatgcacccggttcgacgatcaagccggaagtggccatcgctggcctcgacgcc
ggtgtcgtcactccacaaacccgagtcttcgatccgggctactaccaactgccggatttc
gaccacaagtatcgcaactggaaccacagcggcgacggttgggtagacatggatgcagcg
atcatgcggtccaacgacacctacttctacgacctggcgcacaagctcggcatcgatcgc
cttcacgactacatggcgatgttcggccttggcgagaaagtctcgctcgacatgttcgag
gagtcaccgggcttgatgccgtcccaggcgtggaagcgcgccacccggcgtcaggcctgg
ttccccggcgaaaccgtgatcctcggcataggccagggctatatgcaagtcacgccgctg
caactggctcaagccaccgcactgatcgccaacaagggcgtctggaaccgtccgcacctg
gccaagaccgtcgacggtgtggcgccggtggacgagcacccgatgccgaacatcctgctc
aaggatccgcgtgactgggagcaggtcaaccacggcatgcagatggtgatgcacgatgcc
cgcggcattgctcgtgcggcagcggccggtgcgcaataccgcatcgccggcaagagtggt
acggcgcaagtggtggcgatcaagcagggtgagcgctacaaccgcgagaaaaccctcgaa
cgtcaccgtgacaacgccttgttcgttggctttgcgcccgccgaacatccgaaaatcgcg
atctcggtaatgatcgaaaacggcgaggctggtggccgagtcgcaggtccggtggtgcgg
cagatcatggacgcctggctactcgaccaggacggtcacctcaagccgcaatacgcggcg
ccgaccaaagcgccgggcgatcctcacgtgtaa
DBGET
integrated database retrieval system
