Pseudomonas fluorescens Pf0-1: Pfl01_4078
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Entry
Pfl01_4078 CDS
T00283
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfo03032
]
Pfl01_4078 (gyrA)
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_4078 (gyrA)
Enzymes [BR:
pfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pfl01_4078 (gyrA)
DNA replication proteins [BR:
pfo03032
]
Prokaryotic type
DNA Topoisomerases
Pfl01_4078 (gyrA)
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pfl01_4078 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABA75815
UniProt:
Q3K8T9
LinkDB
All DBs
Position
complement(4607685..4610348)
Genome browser
AA seq
887 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESTA
VVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERV
QEPSEVEGEELEGEEGVELEDGVIGAEPDDAVDNLQADAADEEESQD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tatctcgactacgcgatgagcgtgatcgtcggccgtgcactgccggatgcgcgcgatggc
ttgaagcccgtgcaccgtcgcgtgctgttcgcgatgagcgagctgggcaacgactttaac
aagccgtacaagaaatctgcccgtgtcgtcggtgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgtccgcatggcgcagcctttctccctgcgttac
ctgctggtcgacggccagggcaacttcggttcggtggacggcgacaatgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaactgatcccggcggtcatgccg
acccgcgtaccgaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaaccttggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgaccgtcgatgagctgatgcaatacattcccggtccggacttcccgactgcc
gcgatcatcaacggtcgcgctggcatcatcgaagcctaccgcaccggccgtggccgcatt
tacatgcgcgcccgctcgatcatcgaagacatcgacaaggtcggtggccgtcagcagatc
gtcatcaccgaactcccttaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtaaaagagaagaaactcgaaggcatcaccgaactgcgcgacgagtccgacaaggac
ggtatgcgcgtcgtgatcgaactgcgtcgcggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaatcggtattcggcatcaacatcgttgcgctgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtccgtcaccgtcgc
gaagtggttacccgccgtaccgtgttcgaactgcgcaaggcgcgcgagcgtggtcacatc
ctcgaaggtcaggccgttgccctgtcgaacatcgacccggtcatcgctctgatcaaggct
tcgccgacgccgtcggaagccaaggaagcgctggtcagcacgccgtgggaatccactgcc
gtggtcgcgatggtggagcgtgccggtgccgattcttgccgtcccgaaaacctcgatccg
caatacggtctgcgcgacggcaagtacttcctgtcgccagagcaggcgcaagccattctg
gaactgcgtctgcaccgcctgaccggtctggaacacgaaaagctgctggccgagtatcaa
gagatcctcaatcagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagatcctcgatgcccgtctcgacctgaccctgggcgacatgatcccggaagaagagcgc
gtcgtgaccatttcccacggcggttatgccaagacccagccgctggcggcttaccaggcc
cagcgtcgtggcggtaaaggcaaatcggctaccggcgtgaaggatgaggactacatcgct
cacctgctggtcgccaacagccataccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaaaacctacgaaattccggaggcgtcccgcgccgcccgtggtcgtccgctg
gtcaacctgctgccgctggatgacggtgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcactacatcttcatggccaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgtcagcgcagcgtcggtctgatcgcgctggaactggacgaaggc
gacgtgctgatttctgccgccatcaccgatggcgagcgtgaagtgatgctgttctccgac
ggcggcaaagtgacccgcttcaaggaatccgacgtgcgtgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgtctgccggaagggcagaagttgatttcgatgctgatcccggaa
gaaggcagccagatcctcaccgcttccgagcgtggttatggcaagcgtaccgcgatcacc
gagttccctgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgagcgt
aacggccgtctggtcggtgcggtccaggtgctcgacggcgaggagatcatgctgatttcc
gaccagggcacgctggtgcgtacccgtgtcgacgaagtctccagtctgggtcgtaatacc
cagggcgtgaccctgatcaaactggccaaggatgaaaccctggtcggtctggagcgggtt
caggagccgtcggaagtcgagggtgaagagcttgaaggtgaagaaggtgtcgaactggaa
gatggcgtgatcggcgccgagccggacgatgcggtcgacaacctgcaggcggacgccgca
gacgaagaagagtcgcaagactaa
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