Pseudomonas fluorescens Pf0-1: Pfl01_4736
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Entry
Pfl01_4736 CDS
T00283
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_4736 (phrB)
Enzymes [BR:
pfo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pfl01_4736 (phrB)
DNA repair and recombination proteins [BR:
pfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pfl01_4736 (phrB)
Prokaryotic type
Pfl01_4736 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABA76473
UniProt:
Q3K6Y1
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All DBs
Position
5341280..5342746
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AA seq
488 aa
AA seq
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MIQTETDMQLIWLRSDLRQHDNTALAAAAERGPSVAVYLLSPQQWQEHDDAPCKIDFWLR
NLHKLSKSLGDLNIPLLIRTAPHWDQAPAVLLELCRQLKIEAVHVNEEYGINESRRDAAV
AKALQAEGITFHSYLDQLLFKPGSVLTRTGTYFQVFSQFRKVCYEHLHRSMPSLKQAPGK
QSALNIASDPVPEAIEGFPTPGASLRALWPAGETEARRRLDTFADAQIDYYKSERDFPAK
PGTSQLSAYLAAGVISPRQCLHAALQSNQGEFESGKVGAVTWINELLWREFYKHILVGYP
RVSRHRAFRPETEDLAWRNAPEDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAM
FLTKNLLIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDSAPYFRIFNPVSQSEKFD
SEGLFIKHWLPELAGLNKKEIHNPASVGGLFGVADYPAPIVNLSASRERALAAFKNLPSR
SSQGESDE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgattcagacagaaaccgacatgcaattgatctggctgcgcagcgacttgcgccaacat
gacaacactgccctcgcagccgccgccgagcgtggcccgagcgtggccgtgtacctgttg
agcccgcagcaatggcaggaacatgacgacgcgccgtgcaagatcgatttctggctgcgc
aatctgcacaagctgagcaaaagcctcggcgacctgaacatcccgctcctgatccgcacc
gcgcctcactgggatcaggcaccggcggtgctgctcgagctgtgtcggcaactgaagatc
gaggcagtgcacgtcaacgaggaatacggcatcaacgaaagccgtcgcgacgcagccgtt
gccaaggcgctgcaagccgaaggcataacgttccatagctacctcgaccaattgctgttc
aagcccggcagcgtgctgacccgcaccggcacttactttcaggtgttcagtcagttccgc
aaagtctgctacgagcacctgcaccgttcgatgccttcgctgaaacaggcgccgggcaaa
cagtcagcgctgaacatcgccagcgaccccgttccagaagccatcgaaggattcccgact
cccggcgcatccctgcgcgccctgtggcccgccggtgaaaccgaggcccggcgacgcctc
gacacgttcgccgatgcacagatcgactattacaagagcgaacgtgacttcccggccaaa
cccggcaccagccagctctcggcttatctggccgccggcgtgatctcgccgcgccaatgc
ctgcacgcggccctgcaaagcaatcagggcgaattcgaaagcggcaaggtcggcgctgtc
acgtggatcaatgaattactgtggcgtgagttttacaaacacatcctcgtcggctatccg
cgggtttcacggcatcgcgcattccgtccggaaaccgaagacctggcctggcgcaatgcc
cccgaggacctggccgcctggcaagaggcccgcaccggcttgccgatcatcgacgcggcc
atgcgccaactgctggaaaccggctggatgcacaaccgcctgcgaatggtggtggcgatg
tttctgaccaagaacctgttgatcgactggcgcgaaggcgagcgtttcttcatgcgccac
ctgatcgacggcgacctggccgcgaacaacggcggctggcagtggagcgcctcgaccggc
accgactcggcgccgtactttcgcatcttcaacccggtcagtcagtcggaaaagttcgac
agcgaaggccttttcatcaagcactggctgccggaactggccggcctgaacaagaaagaa
atccacaacccggccagtgtcggcgggctgttcggcgtcgcggactatccggcgccaatc
gtcaatctgagtgcgtcacgggaacgggcgctggcagcgttcaaaaacctgccgtcgcgc
tcgtctcaaggagagagcgatgagtga
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