Pseudomonas fluorescens Pf0-1: Pfl01_4876
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Entry
Pfl01_4876 CDS
T00283
Name
(GenBank) putative sensory box GGDEF/EAL domain protein
Organism
pfo
Pseudomonas fluorescens Pf0-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
Phi-29_GP16_7
Motif
Other DBs
NCBI-ProteinID:
ABA76613
UniProt:
Q3K6J1
LinkDB
All DBs
Position
5496043..5499891
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AA seq
1282 aa
AA seq
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MSNVTPPASVSSTQPAPGSSLRGTLKGALATLVLLLLALLFWQLLDQLRETQKNQRQYTI
DYTADLAAQVSLNMALNAQIALNLLPIVEQPQSADEQQALLRKLQKSLPDLRSLALLSPS
GKILSDSATDSQDADYLSDLVRRSRAQAHYFSNDDDGSVVHLLLHQASGSTRGYWALRLT
PTFFKALTKQGETGIRPLWLVENRINHQIISRDEAMPIGSTSVLTPDDLANSVLTVPLSS
SDWQLRGLFDRQHVLEQLLPAFIGKCLLGLALSLLPFIALLNMRRRQRQVHEGRRRYQDI
FEGTGVALCVLDLSGLNQLFEKAQIQTSDQLKAWLDQPAQRLQLLQELRVTEVNQVALQL
LNVNSCDHAWQLLIDGQPHSQCAIGNQVLDAVLQQQKQLELEIKLPDINGRDQHLWLVLR
LPQEQHDYKAVILSINDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSN
HHLGQTLGYNRTELHQMGEYFWEILLHPEDADYYHRSRQMQRHAGYSQLLQCQLRFRHRD
GKWRRFDIREQALARDKHDQVTRIIGVAKDITEQIEASESLRDSEQRYRMLAESISDVIF
STDSQLSLNYVSPSVQAVLGYDAEWIFQNGWQSTIANPQQLSGIYHLMDRVSKALGKPEQ
LVTLRSQVQTQMFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKD
LRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPNMLTVDEQQDAHL
RYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASE
QRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAA
GDRMLKDMATRLLACVDDDDTVARMGGDEFTLLLQHRSSREMALNRAIHVAEQILGSLVR
PFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASA
LERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVL
EELGLVVDVGDWVISEACRQLKTWHQSRVRVPKVSVNISARQFSDGQLGTRIATILKETG
LPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK
IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLF
GRPMPAGRFEAQFSNDALFMFD
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaacgtcactccgccagcctctgtgagcagcacccaaccggcgcccggctcgtcc
ctgcgcggaacattgaaaggcgcgctggcgacattggtgctgttgctgctcgcgctgctg
ttctggcaattgctcgatcaactgcgcgaaacccagaaaaaccagcgccagtacaccatc
gactacaccgctgacctcgccgcacaggtcagcctgaacatggcgttgaacgcgcagatc
gccctcaacctgctaccgatcgtcgaacaaccgcagtcggccgacgaacagcaggcgctg
ctgcgcaaacttcagaagtcgctgcccgacctgcgcagcctggccctcctcagcccctcc
ggaaaaatcctcagcgacagcgcgactgacagccaagacgccgattacctcagcgatctg
gtacgccgcagccgtgctcaggcgcattacttcagcaatgacgacgatggctcggtggtg
catctgctgttgcatcaggccagcggcagcactcgcggttactgggcactgcggctgaca
cccaccttctttaaagcactgaccaaacagggcgaaaccgggatccgtcctctgtggctg
gtggagaatcgcatcaaccatcagatcatcagccgcgacgaagcgatgcccatcggcagc
accagcgtcctgaccccggacgatctggccaacagcgtgctgaccgtgccgctgagcagc
agcgactggcaactgcgtggcctgttcgaccgccagcatgtgctcgaacaactgctgccg
gcgttcatcggcaaatgcctgttgggcctggcgctttcgctgctgccgtttatcgcactg
ctcaacatgcgccgccgtcagcgtcaggtacatgaagggcgtcggcgttatcaggatatt
ttcgaaggcaccggcgtggcgttgtgcgtgctggatctttcgggactcaaccagctgttc
gaaaaggcccagatccagaccagcgaccagctcaaggcctggctcgaccagcccgcgcag
cgcctgcaattgctccaggaactgcgggttaccgaggtcaaccaggttgcgttgcaactg
ctcaacgtcaattcctgcgaccacgcctggcaattgttgatcgacggtcagccgcacagt
cagtgcgccatcggcaatcaggtgctcgacgccgtactccagcagcaaaagcagctggaa
ctggaaatcaagctcccggacatcaatggccgcgaccagcatctgtggctggtgctgcgc
ctgccgcaggagcagcacgactacaaggccgtgatcctgagcatcaacgacatcaccagc
cgcaaactgatcgaactgtcgctgctggagcgcgaaggtttctggtcggacgtggtgcgc
accgtgccggatcatctgtacgtgcaggacgtgatcagccagcggatgatcttcagcaac
caccacctcggccagaccctcggttataaccgcaccgaactgcatcagatgggcgagtat
ttctgggaaatccttctgcacccggaagacgccgactattaccaccgctcgcggcagatg
cagcgtcacgccggttacagccagttgttgcaatgccagttgcgcttccgtcatcgcgac
ggcaaatggcggcgcttcgacattcgtgaacaggcgctggcccgggacaagcacgatcag
gtgacgcggatcatcggcgtggccaaggacatcaccgagcagatcgaagccagcgaatcg
ttgcgcgacagcgaacaacgctaccggatgctcgccgaaagcatcagcgacgtgattttc
tccaccgacagccaactgtcgttgaactacgtcagcccgtcggtgcaagcggtgctgggc
tatgacgccgagtggattttccagaacggctggcaatcgaccatcgccaacccgcagcaa
ctgagcggcatctatcacctgatggatcgggtcagcaaagcgctgggcaaacccgagcaa
ctggtgactttgcgaagccaggtgcagacccagatgttcctgttcgactgcctgcgcgcc
gacggtcgcaagatcccgatcgaactgcgtctggtgctggtgtgggacgaacatggcgcc
ttcgaaggcgtgctcggggtcggccgcgacatcagccagcagcgccgcgccgagaaagac
ctgcgcatggcggccacggtattcgagcactcgacttcggcgatcctgatcaccgacccg
gccggttacatcgtccaggccaacgaggcgttcagccgggtcagcggctacgcggtcagc
gaagtgctcgaccagttgccgaacatgctgaccgtcgacgaacagcaggacgcgcacctg
cgctacgtgctcaagcagttgcatcagcacagcacctgggaaggcgaagtctggctcaag
cgccgcaatggcgagcattacccggcgtgggtcggcatcactgcggtgctcgatgacgag
ggcgatctggccagttacgtgtgcttcttcagcgacatcagcgagcgcaaggccagcgag
cagcggattcaccgcctcgcctactatgacgccctgacccacctgccgaaccgcacgctg
ttccaggatcgtctgcacaccgcgttgcaatcggccgaacggcagaagtcgtgggtggtg
ctgatgttcctcgacctcgaccgtttcaaaccgatcaacgactccctcggccacgccgcc
ggcgaccgcatgctcaaggacatggccacccggctgctggcctgcgtcgacgatgacgac
accgtggcgcggatgggcggcgacgaattcaccctgctgctgcaacaccgctccagccgc
gagatggcgctgaaccgggcgatccacgtggccgaacagatccttggcagtctggtgcgg
ccgttcgtgctggagggtcgcgaattcttcgtcaccgccagcatcggtatcgccctgagc
ccgcaggacggcaacgaactcagccagttgatgaagaacgccgacaccgcgatgtaccac
gccaaggagcgcggcaagaacaacttccagttctatcaggccgacatgaacgccagtgcg
ctggagcgcctggaactggaaagcgatctgcgccacgccctggagcagaacgaattcgtg
ctgtattaccagccgcagttcagcggcgacggcaaacgcctgaccggcgcagaagccctg
ctgcgctggcgtcatccccgccgcggactggtgccgccgggggacttcattccggtgctc
gaagaactcgggctggtggtggacgtcggcgactgggtcatcagcgaagcctgtcgccag
ctcaaaacgtggcaccagagccgcgtgcgcgtgccgaaggtctcggtgaacatttccgcc
cggcagttctccgacggccagctcggcacgcggatcgccaccatcctcaaggagaccggc
ctgccgccggcgtgcctggagctggaactgaccgaaagtatcctgatgcgcgaagtcagc
gaagcgatgcagatccttgccggtttgaagaacctcggcctgagcatcgcagtcgacgac
ttcggcaccggttactcatcgctgaactacctcaagcaattcccgatcgacgtgctgaag
atcgaccgcaccttcgtcgacggcctgccgtccggcgagcaggacgcgcagattgcccgg
gcgatcatcgccatggcccacagcctgaatctggcggtgattgccgagggtgtggaaacc
catgaacaactggacttcctgcgcgagcatggctgcgacgaggttcagggttatctgttc
gggcggccgatgccggcgggccggttcgaggcgcagttcagcaatgatgcgctgttcatg
ttcgactga
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