Pseudomonas fluorescens Pf0-1: Pfl01_4885
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Entry
Pfl01_4885 CDS
T00283
Symbol
radA
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_4885 (radA)
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pfl01_4885 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
AAA
SLFN-g3_helicase
RecA_N
nSTAND_NTPase5
nSTAND3
AAA_14
AAA_24
Rad51
NTPase_1
ABC_tran
MCM
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ABA76622
UniProt:
Q3K6I2
LinkDB
All DBs
Position
complement(5508329..5509696)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWAGQQAQIK
TLAEVSIEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLAKSMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARQEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQIIAVTRLEQALDSLFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgcaacctttcccaagtgg
gccgggcagtgcggcgaatgcggcgcctggaacactctgaccgaaaccatggtcgagagc
ggcggtgccgccgccccgagcgggcgcaccggctgggccgggcaacaggcccagatcaag
accctggccgaagtcagcattgaagagattccgcgtttttccacagcctccggtgaactc
gaccgagtccttggcggcggtctggtggacggttcggtggtgctgatcggcggcgatccc
ggtatcggcaaatcgacgattctgttgcagaccctgtgcaacctcgccaagagcatgccg
gcgctgtacgtcaccggtgaggaatcccagcaacaggtcgccatgcgcgcacgccgcctg
ggcctgccgcaggatcaactgcgggtcatgaccgaaacctgcatcgaaaccatcatcgcc
accgcccgccaggaaaaacccaaggtgatggtgatcgactcgatccagacgattttcacc
gaacaattgcaatcggcgccgggcggcgtatcccaggtacgcgaaagtgcggcgttgctg
gtgcgttacgccaagcaaagcggcacggcgattttcctggtcggccacgtgaccaaggaa
ggcgcgcttgcagggccgcgggttctggaacacatggtcgataccgtgctgtatttcgaa
ggcgagtccgatggccggttgcgtttgctgcgagcggtaaaaaaccgtttcggtgccgtc
aacgaactcggcgtgttcggcatgaccgacaagggcctgaaagaagtctccaacccttcg
gcgatttttcttacccgcgctcaggaagaagtcccgggcagtgtggtgatggcaacgtgg
gaaggcacccgaccgatgctggtggaagtccaggcactggtggatgacagccatctggcc
aatccgcgtcgggtgacgctgggtctggaccagaatcgtctggcgatgctgttggctgtt
ctgcaccggcatggcggcattccgacccacgatcaggacgtgttcctcaacgtggtcggc
ggggtgaaggtgctggaaaccgcgtctgacctggcgttgatggccgccgtcatgtcgagc
ctgcgcaaccgtccgctcccccatgatttgctggtgtttggtgaagtcggcctgtccggc
gaagtgcgcccggtgccgagcggtcaggagcgattgaaggaagccgccaagcacggcttc
aagcgcgcgatcgtgcccaagggcaatgcgccgaaggaagcgcctccgggtttgcagatc
attgcggtgacgcgtctggagcaggcgctggactcgttgttcgagtga
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