Pseudomonas fluorescens Pf0-1: Pfl01_4924
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Entry
Pfl01_4924 CDS
T00283
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03030
DNA replication
pfo03430
Mismatch repair
pfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pfl01_4924
03430 Mismatch repair
Pfl01_4924
03440 Homologous recombination
Pfl01_4924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfo03032
]
Pfl01_4924
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_4924
Enzymes [BR:
pfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pfl01_4924
DNA replication proteins [BR:
pfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pfl01_4924
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pfl01_4924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABA76661
UniProt:
Q3K6E3
LinkDB
All DBs
Position
complement(5549495..5550106)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRIPAFIEQLTGIS
NAMLRTAPSAEKVMNEVNEFVGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLMVHLAGELRDKHGVSELSHE
LLCKLQRVPAAKVGDHLQRYKVR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcattgcagtcatcgactttgaaaccaccggcatctcgccgagcagcagctgc
cgggccacggaaatcgccgtggtcatgctggaaaacggccgcatcgtcgagcgctaccag
agcctgatgaacgccggcgtccgcatcccggccttcatcgaacaactcaccggcatcagc
aacgccatgctgcgcaccgcgccttcggcggaaaaggtgatgaacgaagtcaacgaattc
gtcggctgcacacccctgctggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactgggccggatcaaacgcacccgtttgcagaacttcgcctgctcgctgctgctggcc
cgccgcctgatgccggcggcgccgaaccacaagctcggtacgctcacgacctttgcccaa
ctgccgcataccggtcaggcgcacagggcgatggcggatgcggagatggcggcgaatctg
atggtgcacttggcaggtgagctacgggacaaacacggtgtgagcgagttgtcccatgaa
ttgttgtgtaagttgcagagggtgccggctgcgaaggtgggtgatcatcttcagcgctac
aaggtgcggtag
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