Pseudomonas fluorescens Pf0-1: Pfl01_4941
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Entry
Pfl01_4941 CDS
T00283
Symbol
ymfC
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfo03009
]
Pfl01_4941 (ymfC)
Enzymes [BR:
pfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Pfl01_4941 (ymfC)
Ribosome biogenesis [BR:
pfo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pfl01_4941 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABA76678
UniProt:
Q3K6C6
LinkDB
All DBs
Position
complement(5566740..5567375)
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AA seq
211 aa
AA seq
DB search
MSRPQRPPSRRPGAKPASSAPRRVAKAPPAEPKLILFNKPFDVLTQFSDGEGRATLKDYI
DIPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPRHKLAKTYWVQVEGLPTAEQLQRLRD
GVELNDGMTLPARARQLDEPELWPRNPPVRFRATIPTTWLELVIREGRNRQVRRMTAAVG
LPTLRLVRVRIGDWTIEGLDQGQWKEVPARL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccccaacgtccgccttcccgccgccccggcgcgaagccagcttcttcagcc
ccgcgccgtgtcgccaaggcaccgcccgctgagccgaagctgatcctgttcaacaaaccg
ttcgatgtgctgacgcaattcagcgacggtgaagggcgggcgacgctcaaggattacatc
gacattccgggtatttacccggccggacggctggaccgcgacagcgagggtttgctgctg
ctgaccaacgacggtcagttgcaggcgcggatcgccgaccccaggcacaaactggcgaaa
acctattgggtgcaggtcgaaggcctgcctacggccgagcagttgcagcgtctgcgtgac
ggcgttgaattgaatgacggcatgaccttgcccgcgcgagcgaggcaactggacgagccc
gaactgtggccgcgcaatccaccggtgcgctttcgcgcaacgattccgacaacctggctg
gaactggtgattcgcgaagggcgcaaccgccaggtgcggcggatgacggcggcggtcggg
ctgccgacgttgcggctggtgcgggtcaggattggtgactggacgatcgaagggctcgat
cagggccagtggaaagaagtgccggcgcgcttataa
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