Pseudomonas fluorescens Pf0-1: Pfl01_4950
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Entry
Pfl01_4950 CDS
T00283
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfo03016
]
Pfl01_4950
Enzymes [BR:
pfo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Pfl01_4950
Transfer RNA biogenesis [BR:
pfo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Pfl01_4950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABA76687
UniProt:
Q3K6B7
LinkDB
All DBs
Position
5577486..5578814
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARI
SKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIAEIIHLAENGVREVTLLGQNVNGYRGLTHDGRLADLAELIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIADVGFDFSYSFVYSQRPGTPAADLADDTPEELKKE
RLNALQHRLNQQGFEISRQMVGSVQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLIQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacaccaggccctggaagtcacggcgcgcgccgaagat
gccgacgtgatcctgctcaacacctgctcgatccgcgaacgcgcccaggaccgggtgtat
tcccagctcggccgctggcgcgaactgaaactggccaacccggacatggtgatcgccgtc
ggcggttgcgtggccagccaggaaggcgcggcgatccgcgatcgcgcgccgtacgtcgac
gtggtgttcggcccgcagaccctgcaccgtctgccggaaatgatcgacgccgcgcgcatc
agcaagctgccgcaagtcgacgtgtcgttcccggaaatcgaaaaattcgaccacctgccc
gagccgcgtatcgacggcccgagcgcctatgtgtcggtgatggagggctgcagcaagtac
tgcacgttctgcgtggtgccttacacccgcggcgaagaagtcagccgaccgttcgacgac
gtgatcgccgagatcatccacctggccgaaaacggtgtgcgtgaagtgaccctgctgggg
cagaacgtcaacggctatcgcgggctgacccacgacggtcgcctggcggacctggccgaa
ctgatccgcgtggtcgcggcggtcgacggcatcgaccgcatccgctacaccacttcgcac
ccgctggagttctccgacagcctgatccaggcccacgccgaagtgccggaactggtcaag
catctgcacttgccggtgcagtcgggttcggaccggatcctggccgcgatgaagcgcaac
cacacggcgctggaatacaaatccaagctgcgcaaactgcgtgccgccgtaccgggcatc
tgcatcagttcggacttcatcgtcggcttcccgggggaaaccgagaaagatttcgaacag
accatgaagctgattgccgacgtcggtttcgacttttcctactcgttcgtttacagccaa
cgcccgggcaccccggctgccgacctggccgacgacaccccggaagagctgaagaaagag
cgcctgaacgccttgcagcaccgtttgaaccagcaagggttcgagatcagccgacaaatg
gtcggttcggtccagcggattctggtgaccgattattcgaagaaagaccccggcgagctg
caagggcggaccgagaataaccgtatcgtcaacttccgctgcgataatccgaccctgatc
ggccagttcgccgacgtccacatcgacgcggcgcaaccgcactcgctgcgcggctcgctg
atccagtaa
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