Pseudomonas fluorescens Pf0-1: Pfl01_5005
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Entry
Pfl01_5005 CDS
T00283
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pfl01_5005 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfo03400
]
Pfl01_5005 (xseB)
Enzymes [BR:
pfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Pfl01_5005 (xseB)
DNA repair and recombination proteins [BR:
pfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Pfl01_5005 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
ABA76742
UniProt:
Q3K662
LinkDB
All DBs
Position
5641715..5641957
Genome browser
AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQAALAQAEQKVQ
VLLERDGELAEEPFDADQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagctgcactggatttcgaacagtccctcgccgacctgcaaacgctg
gtggagcgtctggagaacggtgaattgtcgctggaagactcgttgaccgctttcgagcag
ggcatcggcctgacccgtgactgccaggcggcgctggcccaggccgagcagaaggtccag
gtgttgctggagcgcgatggcgaactcgccgaggaacccttcgacgcggatcagccagaa
tga
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