KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_5032
Entry
Pfl01_5032        CDS       T00283                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:pfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfo03400]
    Pfl01_5032
Enzymes [BR:pfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pfl01_5032
    5.6.2.6  RNA 3'-5' helicase
     Pfl01_5032
DNA repair and recombination proteins [BR:pfo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pfl01_5032
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_IclR AAA_22
Other DBs
NCBI-ProteinID: ABA76769
UniProt: Q3K635
LinkDB
Position
5664341..5668636
AA seq 1431 aa
MNLPLPKDAALAGFHPAVSAWFSSTFPTVTAAQARAWPLIRQRRSTLIAAPTGSGKTLTA
FLAVLDDLVHRGLETPDGLPDETLVVYISPLKALSNDIRINLQNPLAGITDQLRQMDLPA
LEITTAVRTGDTPQKDRAAMRKSAPHILVTTPESLYVLLGSESGRKMLGTTRTVIVDEIH
AIAAGKRGSHLALSLERLQALCAEPLTRVGLSATQKPIDAVARFLVGHDRPCEIIDIGHA
RPRDLGIEVPPVPLSAVMANDVWELVYDRLATLAREHRTTLIFVNTRRLAERLSRHLSER
LGKQAVAAHHGSLAKEFRLDAEQRLKRGELQVLIATASLELGIDIGEVDLVCQIASPRSI
AGFLQRVGRSGHQVGGTPKGRLFATTRDDLIECAALLDCVRRGELDTLHIPEAPLDVLAQ
QIIAEVSCQEWAEDDLLALLRRAEPYARLDEKHFQALLGMLAEGYNGRQGIRSAYLHRDA
VSRTLRGRRGARLTAVTSGGTIPDNADYSVLLEPQGLNIGSVNEDFAVESIAGDVFQLGN
ASYRILRVEAGKVRVEDAQGQPPTIPFWLGEAPGRSDELSAAVARLHAQLDQLLSASPGN
LQPALDWLTDTLGLNLASAEQLVDYLARARLALGALPSKDTLLMERFFDESGGTQLIIHS
PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDEVWRYLHSNSAE
HILIQAVLDAPLFGVRWRWNAGVALALPRFTGGRKVAPQLQRMKSEDLIASVFPDQIACL
ENLAGEREIPQHPLVEQTLDDCLHEAMDSEGWLELLRRMERGEVRLIARDLPAPSPLAAE
ILSARPYTFLDDAPLEERRTQAVLNRRWSDPQSADDLGALDADAINAVREEAWPTPNSAD
EMHEALMSLACISDREVEANPQWHDWLNDLADTGRACRLQIGPEHSLWLARERLTCLQAL
YPQAQSALPALPGFDEAWTADDALIEVIRARLGAFGPLPLAAIAVPLALMLASVHQALAH
LEREGYVLRGQFTPGSTVEEWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQHV
SPSTRGQGNAVLPAIVAQFEGYPAAASAWDSDLLPARLKDYSPSWLDDLCRSGKLVWTRL
SARQNISGTALRSTPIVLLPRSQVGLWSALAEQTPVSELSPKTRKVFDALNQHGALFFDE
LIHEAHLLRTELEIALQELVGAGLVNADSFAGLRALITPASKRQQRSSRRGRGAFVGGMD
DAGRWALLRRGPVVESRQTASPETLEHIAMTLLRRYGVVFWRLLEREADWLPSWRELLRT
FHRLEARGEIRGGRFVSGLAGEQFALPEAIPLLREVRRRPHDGSLIAVCGVDPLNLAGTL
LPGAKVPALASNRLVYRDGLPVAAEVAGKPQFWVELDSAAMIEIRNRLTRH
NT seq 4296 nt   +upstreamnt  +downstreamnt
atgaatctgcccctccccaaggacgcggccctggcaggcttccaccccgccgtcagcgcc
tggttcagcagcaccttcccgacggtgacggccgcccaggcccgcgcatggccattgatc
cgccagcgccgctcgacgctgatcgccgcgcccactggttccggcaagaccctcaccgcg
ttcctcgcggtgctcgacgatctggtccaccgtggcctggaaaccccggacggtctgccg
gacgaaaccctggtggtctacatttcgccgctcaaggcgctgtccaacgacatccgcatc
aatctgcagaaccctctggccgggattaccgaccagttacgccaaatggacctgccggcg
ctggaaatcaccaccgccgtgcgcaccggcgacaccccgcagaaagaccgcgccgccatg
cgcaagagcgcgccgcacatattggtgaccaccccggaatcgctctacgtgctgctcggc
tccgagtccggccgcaaaatgctcggtaccacgcgcacggtgatcgtcgatgaaatccac
gccatcgccgccggcaaacgcggcagtcacctggccttgagtctcgaacgcttgcaggcg
ctgtgcgccgaaccactgacccgcgtcggtctgtcggccacgcaaaaaccgatcgatgcg
gtcgcgcggtttctggtcggccatgaccgcccgtgcgaaatcatcgatatcggccacgcg
cgcccacgggatctgggcatcgaagtgccgccggtgccattgtcggccgtgatggccaat
gacgtctgggaactggtttatgaccgcctcgccacactggctcgtgaacaccgcaccacg
ctgattttcgtcaacacccgacgtctggccgaacgcttgagccgacacctgagcgaacgc
ctcggcaaacaggcggtggcggcgcaccacggcagtctggccaaagagtttcgactcgat
gcggaacagcggctcaagcgcggcgagttgcaagtgctgatcgccaccgcgtcgctggaa
ctggggatcgacatcggcgaagtcgacctcgtctgccagatcgcttcaccgcgctcgatt
gccggttttctgcaacgggtcggccgctccgggcaccaggtcggcggcacacccaagggg
cgcctgttcgccaccacccgcgacgacctgatcgaatgcgccgcgctgctcgactgcgtg
cgccggggtgaactcgatacgctgcacatccccgaagcgccgctggatgtgctggcgcag
cagatcatcgccgaggtcagttgccaggagtgggccgaggacgatttgctcgcgctgctg
cgccgagccgagccctacgcccgcctcgacgaaaaacactttcaggcactgctgggcatg
ctcgccgagggctacaacggccgtcagggcatccgcagcgcctacctgcaccgcgacgcc
gtcagccgaaccctgcgcggacgacgcggtgcaaggctgacggcagtcaccagcggcggc
actatccccgacaacgccgactacagcgttttgctcgaacctcagggcctgaacatcggc
agcgtcaacgaagacttcgccgtggaaagcatcgccggcgatgtgttccaactcggcaac
gcttcttatcggatcctgcgggtggaggccggcaaggtgcgggtcgaggacgctcaaggc
cagccaccgaccattccgttctggctcggcgaggcgccggggcgcagcgacgaattgtcg
gcggccgtggcgcgcctgcacgcgcagctcgatcaattgctcagcgccagccccggcaac
ctgcaaccggccctcgactggctgaccgacaccctcggcctgaacctggccagcgccgaa
caactggtggattacctggcccgcgcccgcctcgccctcggcgccctgccgtcgaaggac
acgctgctgatggagcgttttttcgacgagtccggcggcacccaactgatcatccattcg
ccgttcggcagccgcatcaaccgcgcctggggcctggccctgcgcaagcgtttctgccgc
actttcaacttcgaattgcaggcagccgccagcgaagacgcgatcgtgctgtcgctgtcc
accagccacagtttcgaactcgatgaagtctggcgttacctgcacagcaacagcgccgag
cacattctgattcaagcggtgctggatgcgccgctgttcggcgtgcgctggcgctggaat
gccggggtggcgctggccctgccgcggtttaccggcgggcgcaaggtcgcgccgcaattg
cagcggatgaaaagcgaagacctgatcgccagcgtgtttcccgatcagatcgcctgcctg
gaaaacctcgccggtgaacgggaaattccccagcatccgctggtggaacagaccctcgac
gattgcctgcacgaagcgatggacagcgaaggctggctcgaactgctgcggcgcatggag
cgcggcgaagtgcgcctgatcgcccgtgacctgccggcgccctcgccgttggcggcggaa
atcctcagtgcccgcccttacacctttctcgacgatgcgccgctggaagagcgtcgcacc
caggcagtgctcaaccgccgctggagtgatccgcaatccgccgatgacctcggcgcgctg
gacgccgacgcgatcaacgccgtgcgcgaagaagcctggccgacgccgaacagcgccgat
gaaatgcacgaagcattgatgagcctggcctgcatcagcgaccgcgaagtcgaggcaaat
ccgcagtggcacgactggctgaatgacctggccgataccgggcgagcctgccgattgcag
atcggtcccgagcattcactgtggctggcaagagaacgcctgacctgtctgcaagcgctt
tatccacaggcgcagtcggcactgcccgcgctgcccggtttcgacgaagcatggacggcc
gatgacgcactgatcgaagtgatccgcgcgcggctcggcgcattcggaccgctaccgctg
gcggcgattgccgttccgctggcgttgatgctggcctctgttcatcaagccctcgctcat
ctggagcgcgaaggttacgtactacgcggccagttcacgcctggatcgaccgttgaggaa
tggtgcgaacgccatctgctggcgcgcattcaccgctacacggtcaagcgtctgcgccgg
gaaatcgagccggtggcgttgcaggatttcatgcggtttctgttcgactggcagcacgtg
tccccgtccacccgtggtcagggcaacgccgtattgccggcgattgtcgctcagttcgag
ggctacccggccgctgcttcagcctgggacagcgacctccttcccgcgcggctcaaggac
tattcaccgagctggctggacgatctgtgccgcagcggcaaactggtgtggacgcgcctc
agcgcccggcaaaacatcagcggcacggcgttgcgcagtacaccgatcgtgttgctgcca
cgcagtcaggtcggcttgtggagtgcactggccgagcagacgccggtcagcgaactgtcg
cccaagacccgcaaggttttcgacgcgctgaaccagcacggcgcgctgtttttcgatgag
ctgatacatgaagcgcacctgctgcgcaccgagctggaaatcgccttgcaggaactggtc
ggcgccgggctggtgaatgccgacagctttgccggattgcgggcgctgatcaccccggcg
agcaagcgccagcagcgcagcagtcgacgcgggcgcggggcgtttgtcggtgggatggac
gacgccgggcgctgggcgcttttgcgtcgcgggccggtggtggaaagccgtcaaacggcg
tcgcccgaaaccctagaacacatcgccatgaccttgttgcgccgctatggcgtggtgttc
tggcgcctgctggaacgtgaggccgactggctgccgagctggcgcgaactgctgcgcacg
ttccatcgactggaggcgcgcggcgagattcgtggcgggcggtttgtcagcggtctggcc
ggcgagcaattcgccctgcccgaggcaattccgctgctgcgcgaagtccgccggcgcccc
catgacggcagcctgattgcggtgtgcggcgtcgatccgctgaacctcgccgggaccttg
ctgccgggggcgaaagtgccggcgctggcgagcaatcggctggtgtatcgcgacgggttg
ccggtcgctgccgaggtcgcgggcaagccgcaattctgggtggagctggactccgccgcc
atgatcgaaatccgcaacaggctgacccgtcactga

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