Pseudomonas fluorescens Pf0-1: Pfl01_5248
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Entry
Pfl01_5248 CDS
T00283
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfo03009
]
Pfl01_5248 (dbpA)
Enzymes [BR:
pfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Pfl01_5248 (dbpA)
Ribosome biogenesis [BR:
pfo03009
]
Prokaryotic type
rRNA helicases
Pfl01_5248 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
PRAI
Motif
Other DBs
NCBI-ProteinID:
ABA76985
UniProt:
Q3K5G9
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All DBs
Position
5908288..5909724
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AA seq
478 aa
AA seq
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MARGCYTARHFVLQASPVTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKG
MDLIAQAKTGSGKTAAFGIGLLNPINPRYFGCQALVICPTRELADQVAKEIRRLARAEDN
IKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLD
MGFYDAIEDIIEQTPARRQTLLFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIEQRF
YEISPEERMSAVTKVLHHFRPASTVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDR
DQVLAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGI
AVSLVAPSEAHRAQAIEQLQKTPLNWDQVDNLKSQGGAPLQPPMSTLCIAGGRKDKVRPG
DILGALTGEAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGKIKGRSLRVRVL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtggccagaggctgctacactgcgcgacattttgttttgcaggccagtcccgtgaccacc
atcgccaccgcttttaatactttgccgctgtccgccgccatgctggctaacctcgactcc
ctcggttatgcccagatgacgccgatccaggcgcagagcttgccggtgatcctcaagggg
atggacctgatcgcccaggccaagaccggcagcggcaagactgccgcgttcggtatcggc
ctgctgaacccgatcaatccgcgctacttcggttgccaggcgctggtaatttgcccgact
cgcgaactggctgaccaggtcgccaaggaaatccgccgtctggcccgtgccgaagacaac
atcaaggtcctgaccctgtgcggcggcgtgtccttcggcccgcagatcggctcgctggag
cacggcgcgcacatcatcgtcggcaccccgggccgcatccagcagcacctgcgcaagggt
tcgctggtcctcgacggcctcaacacgctgatcctcgacgaagccgaccgcatgctcgac
atgggtttctacgacgccatcgaagacatcatcgagcagaccccggcccgtcgtcagacc
ctgctgttctcggcgacctacccggtgggcatcaagcaactggcgtcgaagttcatgcgc
gatccgcaaacggtcaaggccgaagcgttccacgacgatacccagatcgagcagcgcttc
tacgagatttctccggaagagcgcatgagtgcggtgaccaaggttctgcaccacttccgt
ccggcctccaccgtggcgttctgcttcaccaagcagcaagtgcaggaaactgtcgatcac
ctgacctccaaaggcatttccgccgtcggcctgcacggcgatctggagcagcgtgaccgc
gatcaggtgttggcgatgttcgccaaccgcagtacttcggtactggttgccaccgacgtt
gccgcccgtggtctggacattgatgcactggacatggtgatcaacgtcgaactggcccgc
gactcggaaatccacattcaccgtgttggccgtaccggtcgtgccggcgagaaaggcatc
gcggtcagcctggtggcgccgtccgaagcgcaccgcgcgcaagccatcgaacaactgcag
aagaccccgctgaactgggatcaggtggacaacctcaagtcccagggcggtgccccgctg
caaccgccgatgagcacgctgtgcatcgctggcggccggaaagacaaggtacgtccgggc
gacattcttggcgcactgaccggtgaggccggcattccgggcgcccaggtcggcaagatc
gcgatctttgacttccagtcctatgtggccgtcgagcgcaccgtggtcatgcaggcgctg
cagcgtttgaacaacggcaagatcaagggtcgttcgctgcgcgtccgggttttgtaa
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