Pseudomonas fluorescens Pf0-1: Pfl01_5293
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Entry
Pfl01_5293 CDS
T00283
Name
(GenBank) putative malonate utilisation LysR-family regulatory protein
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfo03000
]
Pfl01_5293
Transcription factors [BR:
pfo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pfl01_5293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ABA77030
UniProt:
Q3K5C4
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All DBs
Position
5955997..5956914
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AA seq
305 aa
AA seq
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MLIDEELTLKKLEVFLAFMRTGNLARAAAELQTSNVSVHRAIHSLESALRCPLFKHEGRN
LTPLESAYVLEERAQKLIQDVVESVRLTREAAGFSAERFKLGSLYSLTVKTVPQLIMGLK
IRRSELNIDLILGSNIDLLYKLKNMEVDAILVSLDETVNDPDCEQIPLFSDDIFLATPAD
SRFAQRSEVDLAEVRDETFITLTQGFATHQDGIRVFRQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVKLIPLQEKYRLQQHIGVVFLKAKERDPNLLALLAECRMYA
NRQST
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgacgaagagttgaccctgaagaaactcgaggtgttcctcgccttcatgcgt
accggcaacctcgcccgcgccgccgccgagctgcagaccagcaacgttagcgtgcaccgc
gcgatccattcgctggaaagcgccctgcgctgtccgctgttcaagcacgaagggcgcaac
ctgacgccgctggaaagcgcctacgtgctcgaggagcgggcgcagaagctgattcaggac
gtggtcgaaagcgtacgcctgacccgcgaagccgccgggttctcggctgaacgcttcaag
ctcggctcgctgtattcgctgacggtgaaaaccgtgccgcagctgatcatgggcctgaag
atccgccgcagcgaactcaatatcgacctgatcctcggctcgaacatcgacctgctctac
aagctgaaaaacatggaagtcgacgcgatcctggtgtcgctggacgaaaccgtcaacgac
ccggactgcgagcagattccgctgttttccgacgacatcttcctcgccaccccggcggat
tcgcgtttcgcgcagcgcagcgaagtggacctggccgaggtgcgcgacgaaaccttcatc
accctgacccaaggcttcgccactcatcaggacggtattcgggtgttcaggcaggcgggg
ttcgagccgaaggtggcgatgcaggtcaacgacatcttcaccctgctgagcatggtcagc
tccggggtcggttatgcgttgctgccggggaggattgcggcggtgtacgagaaccgggtg
aagctgattccgttgcaggagaaataccggttgcagcagcacatcggggtggtgtttttg
aaggctaaagagcgggatccgaatctgctggcgttgttggcggagtgtcggatgtatgcc
aatcgccagtccacctaa
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