Pseudomonas fluorescens Pf0-1: Pfl01_5370
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Entry
Pfl01_5370 CDS
T00283
Name
(GenBank) putative LysR family transcriptional regulator protein
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfo03000
]
Pfl01_5370
Transcription factors [BR:
pfo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pfl01_5370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_11
PBP_like
HTH_24
MarR
HTH_50
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ABA77107
UniProt:
Q3K547
LinkDB
All DBs
Position
complement(6031902..6032765)
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AA seq
287 aa
AA seq
DB search
MLSAELKAFYMVARLGSITLAAKKLGLSQPTVTTQIRNLESQYSVELFYRGGRRLSVSDE
GARLLPMVKALLQQEADIEFFLRNSGQVQGALRIAATAPYYILDLVKTFRERLPQVEVSV
EIGNSQQVLEALEDYRVDVAASSQLLDDARLIRRVLGSDPLVLAVHRNHPLAAHDHVTLS
ALAGHTLLMREPGSTTRRLTEELLASAGVSFGPLLEIGSRESIREAVLRNIGISIIARQE
VPHDPQLRVLTLENAPQIPEYLYCLKERKNARLPAAFLGLAQEMSPA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagtgccgagctgaaagcgttttacatggtggcccgcttgggcagcatcacgctg
gcggcgaaaaagctcggcctcagccaaccgaccgtgaccacccagatccgcaatctggaa
agccagtattcggtagagctgttctaccgtggcggccggcgcctgagtgtcagcgacgaa
ggtgcgcggctgttgccgatggtcaaggcgttgttgcagcaggaggccgacatcgaattc
ttcctgcgcaacagtggccaggtgcagggtgcgctgcgcatcgccgccaccgcgccgtat
tacatcctcgatctggtgaagaccttccgcgagcgcctgccgcaggtggaggtgtcggtg
gaaatcggcaactcgcagcaggtgctcgaagcgctggaggattatcgggtggatgtcgcg
gcgtcgtcgcaattgctcgacgatgcccggctgatccgccgggtgctcggcagcgacccg
ctggtgctggcggtgcatcgcaatcatccgctggcggcgcacgaccatgtgacgctgagc
gcgctggccggacataccttgctgatgcgcgaaccgggttcgaccactcgacggctcacc
gaagagttgctggccagcgccggcgtcagttttggcccgttgctggagataggcagccgc
gaatcgatccgcgaggcggtgctgcgcaacatcggcatcagcatcatcgcccgccaggaa
gtgccgcacgatccgcagttgcgggtgctgaccctggagaatgcgccgcagattcccgaa
tacctctactgcctcaaggaacgcaagaacgcccggttgccggcggcgtttctcggactg
gcgcaggaaatgtccccggcctga
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