Pseudomonas fluorescens Pf0-1: Pfl01_5579
Help
Entry
Pfl01_5579 CDS
T00283
Name
(GenBank) conserved hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pfo
Pseudomonas fluorescens Pf0-1
Pathway
pfo02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
Pfl01_5579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfo02044
]
Pfl01_5579
Secretion system [BR:
pfo02044
]
Type VI secretion system
Imp/Vas secretion system core components
Pfl01_5579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
ABA77316
UniProt:
Q3K4I8
LinkDB
All DBs
Position
complement(6250779..6252110)
Genome browser
AA seq
443 aa
AA seq
DB search
MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNMPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLGHRGDTIAERIRSNGKVGGAEIGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSSDSKRPRLDSRYSHADQGASFRKL
MESIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRNR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccataaagtcatctggcaggaaggcatgctgctgcgcccgcagcacttccag
cacaacgaccgctactacgatcaccagatgaagacccgcacccagttgctgggcggctac
acctggggtttcctgaatctggagatcgacctgcagttcctcaacatgggcaaactggtg
atcagtgaagcctcggggatcctgccggacggcagcctgttcgaactcggtggcaacacc
gagccgctggcgctggacgtaccgccgaacaccggcaacatgccgatctacctggcgctg
ccgctggtcaccggtaaccacatcgaggcccggcgcccggagcagtccgatgtgctggcg
cgctacaccgcatatgacgccgaagtcgccgactccaacgccggtgatgattccgccagc
caggtcagttgcggccgcccggacttcaagctgttgctcggcgagcagcagagtgaccag
gcttacgtgaagctgaagatctgcgatgtgctcgacaccacgccggacggcgtgatcagc
ctcgatccggatttcgtgccgacctacattcaggcccacgcctccagctacctgctgtcg
tgcctgaaagaagtgatcagcatgctcggccaccggggcgacaccattgccgagcgcatt
cgttcgaacggcaaggtcggcggcgcggaaatcggcgacttcatgatgctgcaactgata
aaccgcaccgaactgctgctgcgccactacctgggcctggagcaggttcacccggaagag
ttgtatcgtacgctgctgaccatgctcggcgatctggcgacgttctccagcgacagcaaa
cgcccgcgtctggacagccgctactcccacgccgatcagggcgcgagcttccgcaaactg
atggagtcgatccgtcaggtgctgtcgatggtgctggaacagcacgccatcgaactgatc
ctgcaagcgcgtcagtacgggatcatcgtgtcgccgctgcacgaccacaaactgctgggc
tcggcgtcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgcaaccgc
ttgcctgcgcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcac
ctgccggggatcaaggtcaaaccgttgccggtggccccgcggcagatcgcgttccactcc
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggcttcgcgttccatgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
DBGET
integrated database retrieval system